RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 INTS6LQ5JSJ4 861 aaKnown RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 CD300LGQ6UXG3 332 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 RGS9BPQ6ZS82 235 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 ADAM32Q8TC27 787 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 IRGQQ8WZA9 623 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 CAPN7Q9Y6W3 813 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 ARVCFO00192 962 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 DCLK1O15075 740 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 MT-ND3P03897 115 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 BDNFP23560 247 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 HCAR3P49019 387 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 MTFR1Q15390 333 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 SLC1A5Q15758 541 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 HHATQ5VTY9 493 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PM20D1Q6GTS8 502 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PDZD4Q76G19 769 aaPredicted RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 BHLHA9Q7RTU4 235 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 SLC26A11Q86WA9 606 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 THEM5Q8N1Q8 247 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 P2RY11Q96G91 374 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 SIGLEC10Q96LC7 697 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 RHOBTB2Q9BYZ6 727 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PITPNM3Q9BZ71 974 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 TTLL3Q9Y4R7 772 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 ARHGEF37A1IGU5 675 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 DNM1LO00429 736 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 TM9SF1O15321 606 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 OPHN1O60890 802 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF189O75820 626 aaPredicted RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 MYCP01106 439 aaPredicted RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 C1QAP02745 245 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 PRKCHP24723 683 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 MBTPS1Q14703 1052 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 MAPRE1Q15691 268 aaKnown RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 ZKSCAN8Q15776 578 aaPredicted RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 PDK4Q16654 411 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 DENND5BQ6ZUT9 1274 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF534Q76KX8 674 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 TRPM8Q7Z2W7 1104 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF598Q86UK7 904 aaKnown RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 SCML4Q8N228 414 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 CCNYQ8ND76 341 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 EBNA1BP2Q99848 306 aaKnown RBP13.81□□□□□ -0.2
CSTF2-201ENST00000372972 COLEC11Q9BWP8 271 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 ARL2BPQ9Y2Y0 163 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 NR2E3Q9Y5X4 410 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
CSTF2-201ENST00000372972 FAM72CH0Y354 149 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 RNF103O00237 685 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 APOEP02649 317 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 MLNP12872 115 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 ERCC2P18074 760 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 FAAP100Q0VG06 881 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 SEPT7Q16181 437 aaKnown RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 FAM72AQ5TYM5 149 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 FAM72DQ6L9T8 149 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 LVRNQ6Q4G3 990 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 EDEM1Q92611 657 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 PKMYT1Q99640 499 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 WDCPQ9H6R7 721 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 PLAC1Q9HBJ0 212 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 DMAP1Q9NPF5 467 aaPredicted RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 ANLNQ9NQW6 1124 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 TMLHEQ9NVH6 421 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF180Q9UJW8 692 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 MAD1L1Q9Y6D9 718 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 TSC2P49815 1807 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 H0YHG0 523 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 INPPL1O15357 1258 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 NCAM2O15394 837 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 CXCR3P49682 368 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 ZNF135P52742 658 aaPredicted RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 TPI1P60174 286 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 PARP6Q2NL67 630 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 LGSNQ5TDP6 509 aa13.8□□□□□ -0.2
CSTF2-201ENST00000372972 TTC39BQ5VTQ0 682 aaPredicted RBP13.8□□□□□ -0.2
CSTF2-201ENST00000372972 BSPRYQ5W0U4 402 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms