RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 FAM170AA1A519 330 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 THAP12O43422 761 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 ACSL4O60488 711 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 FBXO21O94952 628 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 FGFR1OPO95684 399 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 IGLV3-25P01717 112 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 NCAM1P13591 858 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 HLA-EP13747 358 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 SDHBP21912 280 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 GNA15P30679 374 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 CD70P32970 193 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 HARS2P49590 506 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 COPAP53621 1224 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 TBX4P57082 545 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 NUMA1Q14980 2115 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 PTPRNQ16849 979 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 EXOC3L4Q17RC7 722 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 MPPE1Q53F39 396 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 GBP6Q6ZN66 633 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 C11orf57Q6ZUT1 292 aaPredicted RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 TRMT11Q7Z4G4 463 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 PASD1Q8IV76 773 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 ZNF366Q8N895 744 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 C12orf50Q8NA57 414 aaPredicted RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 CYB5D2Q8WUJ1 264 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 TMA16Q96EY4 203 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 CPXM1Q96SM3 734 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 EDEM2Q9BV94 578 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 NUCKS1Q9H1E3 243 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 MTG2Q9H4K7 406 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 THAP9Q9H5L6 903 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 ST7Q9NRC1 585 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 ABCB8Q9NUT2 735 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 APEX2Q9UBZ4 518 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 INTS6Q9UL03 887 aaKnown RBP11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 CYP8B1Q9UNU6 501 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 PCDH15Q96QU1 1955 aa11.43□□□□□ -0.58
EXOSC1-202ENST00000370885 GTPBP10A4D1E9 387 aaKnown RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 C4orf47A7E2U8 309 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 GIPC1O14908 333 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 MAP3K13O43283 966 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 TBL1XO60907 577 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 LATS1O95835 1130 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 CYBBP04839 570 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 USP8P40818 1118 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 MTIF2P46199 727 aaKnown RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 RPS24P62847 133 aaKnown RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 RING1Q06587 406 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 PDCLQ13371 301 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 MAN2A1Q16706 1144 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 FSCBQ5H9T9 825 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 PEAR1Q5VY43 1037 aaPredicted RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 MMS22LQ6ZRQ5 1243 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 LPCAT2Q7L5N7 544 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 ANKS1BQ7Z6G8 1248 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 SLC47A2Q86VL8 602 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 CFAP52Q8N1V2 620 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 STK32AQ8WU08 396 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 MYO19Q96H55 970 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 BPIFA3Q9BQP9 254 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 LSM14BQ9BX40 385 aaKnown RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 SLC2A11Q9BYW1 496 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 CIPCQ9C0C6 399 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 PLCB1Q9NQ66 1216 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 PILRBQ9UKJ0 227 aa11.42□□□□□ -0.58
EXOSC1-202ENST00000370885 AKAP13Q12802 2813 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ERBB2P04626 1255 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ADRB1P08588 477 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 MAOBP27338 520 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 RPL6Q02878 288 aaKnown RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ZNF33AQ06730 810 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 MEA1Q16626 185 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 VWA3BQ502W6 1294 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 DCAF6Q58WW2 860 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ZC3H12AQ5D1E8 599 aaKnown RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 OTUD1Q5VV17 481 aaPredicted RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 SDE2Q6IQ49 451 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 KIAA1324Q6UXG2 1013 aaKnown RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 BEND5Q7L4P6 421 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 ENOSF1Q7L5Y1 443 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 C11orf74Q86VG3 221 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 CACUL1Q86Y37 369 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 DHX40Q8IX18 779 aaKnown RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 FAM71AQ8IYT1 594 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 C1orf131Q8NDD1 294 aaKnown RBP11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 OR2I1PQ8NGU4 316 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 AZIN2Q96A70 460 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 FAM149B1Q96BN6 582 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 SPACA7Q96KW9 195 aa11.41□□□□□ -0.58
EXOSC1-202ENST00000370885 TUBGCP2Q9BSJ2 902 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms