RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MPP2Q14168 576 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 DDR2Q16832 855 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 FAM26DQ5JW98 314 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 VSTM1Q6UX27 236 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 METTL23Q86XA0 190 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 ANKMY2Q8IV38 441 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM3-212ENST00000368533 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 SLCO2A1Q92959 643 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 RMDN2Q96LZ7 410 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 DDX50Q9BQ39 737 aaKnown RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 SNRNP25Q9BV90 132 aaKnown RBP11.02□□□□□ -0.65
TPM3-212ENST00000368533 ETNK1Q9HBU6 452 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 SLC27A5Q9Y2P5 690 aa11.02□□□□□ -0.65
TPM3-212ENST00000368533 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 SNX3O60493 162 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 COQ9O75208 318 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 PIAS1O75925 651 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 AMHP03971 560 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ALDH3A1P30838 453 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 GRIK1P39086 918 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 LBX1P52954 281 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 GDF10P55107 478 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 BFSP2Q13515 415 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ITIH4Q14624 930 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 TFDP3Q5H9I0 405 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ARHGAP17Q68EM7 881 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 TAS1R1Q7RTX1 841 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 MYLK4Q86YV6 388 aaPredicted RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 ZBED8Q8IZ13 594 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 RCOR2Q8IZ40 523 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 SLC43A3Q8NBI5 491 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 UTP4Q969X6 686 aaKnown RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 CNPY3Q9BT09 278 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 M0QYT0 321 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 CREB3O43889 395 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 NCAM1P13591 858 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 ITGB8P26012 769 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 LMNB2Q03252 620 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 KLF1Q13351 362 aaPredicted RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 C4orf33Q8N1A6 199 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 TTC8Q8TAM2 541 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
TPM3-212ENST00000368533 NRDE2Q9H7Z3 1164 aa11.01□□□□□ -0.65
TPM3-212ENST00000368533 LIN7AO14910 233 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 BANF1O75531 89 aa11□□□□□ -0.65
TPM3-212ENST00000368533 CA8P35219 290 aa11□□□□□ -0.65
TPM3-212ENST00000368533 LHX1P48742 406 aa11□□□□□ -0.65
TPM3-212ENST00000368533 ERFP50548 548 aa11□□□□□ -0.65
TPM3-212ENST00000368533 FASTKD3Q14CZ7 662 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 STILQ15468 1287 aa11□□□□□ -0.65
TPM3-212ENST00000368533 PRSS55Q6UWB4 352 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 CYP4V2Q6ZWL3 525 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 TTC39CQ8N584 583 aa11□□□□□ -0.65
TPM3-212ENST00000368533 CEP41Q9BYV8 373 aa11□□□□□ -0.65
TPM3-212ENST00000368533 TMEM39AQ9NV64 488 aa11□□□□□ -0.65
TPM3-212ENST00000368533 C3orf70A6NLC5 250 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 ETS2P15036 469 aa11□□□□□ -0.65
TPM3-212ENST00000368533 TAP1Q03518 808 aa11□□□□□ -0.65
TPM3-212ENST00000368533 GAD2Q05329 585 aa11□□□□□ -0.65
TPM3-212ENST00000368533 PDIA2Q13087 525 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 STAT4Q14765 748 aa11□□□□□ -0.65
TPM3-212ENST00000368533 SEPT7Q16181 437 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 FAXCQ5TGI0 409 aa11□□□□□ -0.65
TPM3-212ENST00000368533 LMNTD2Q8IXW0 634 aa11□□□□□ -0.65
TPM3-212ENST00000368533 TRAF3IP1Q8TDR0 691 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 MAK16Q9BXY0 300 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 PITPNM3Q9BZ71 974 aa11□□□□□ -0.65
TPM3-212ENST00000368533 PREBQ9HCU5 417 aa11□□□□□ -0.65
TPM3-212ENST00000368533 WBP1LQ9NX94 342 aa11□□□□□ -0.65
TPM3-212ENST00000368533 KLHL14Q9P2G3 628 aa11□□□□□ -0.65
TPM3-212ENST00000368533 ASB3Q9Y575 518 aa11□□□□□ -0.65
TPM3-212ENST00000368533 MYO18AQ92614 2054 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 XPO1O14980 1071 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 LIASO43766 372 aa11□□□□□ -0.65
TPM3-212ENST00000368533 ENTPD5O75356 428 aa11□□□□□ -0.65
TPM3-212ENST00000368533 RPL9P32969 192 aaKnown RBP11□□□□□ -0.65
TPM3-212ENST00000368533 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
TPM3-212ENST00000368533 IL9RQ01113 521 aa11□□□□□ -0.65
TPM3-212ENST00000368533 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
TPM3-212ENST00000368533 PPP1R2P3Q6NXS1 205 aa11□□□□□ -0.65
TPM3-212ENST00000368533 TP53INP2Q8IXH6 220 aa11□□□□□ -0.65
TPM3-212ENST00000368533 COLGALT2Q8IYK4 626 aa11□□□□□ -0.65
TPM3-212ENST00000368533 SEPT8Q92599 483 aa11□□□□□ -0.65
TPM3-212ENST00000368533 ARHGEF3Q9NR81 526 aa11□□□□□ -0.65
TPM3-212ENST00000368533 RHBDL2Q9NX52 303 aa11□□□□□ -0.65
TPM3-212ENST00000368533 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
TPM3-212ENST00000368533 MYO9BQ13459 2157 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 ZSCAN9O15535 394 aaPredicted RBP10.99□□□□□ -0.65
TPM3-212ENST00000368533 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
TPM3-212ENST00000368533 KRT7P08729 469 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms