RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 LGI2Q8N0V4 545 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 NAT16Q8N8M0 369 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 DDX50Q9BQ39 737 aaKnown RBP14.4□□□□□ -0.1
TPM3-211ENST00000368531 BBS2Q9BXC9 721 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 ZWILCHQ9H900 591 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 SLC2A4RGQ9NR83 387 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 SPHK2Q9NRA0 654 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 GPATCH2LQ9NWQ4 482 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 ARHGEF38Q9NXL2 777 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 STIM2Q9P246 746 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 SALL4Q9UJQ4 1053 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 HYOU1Q9Y4L1 999 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 COL4A2P08572 1712 aa14.4□□□□□ -0.1
TPM3-211ENST00000368531 MACROD2A1Z1Q3 448 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 NEDD8-MDP1E9PL57 170 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 PJA2O43164 708 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 PRPSAP2O60256 369 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 LRCH4O75427 683 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 PROSCO94903 275 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 LATS1O95835 1130 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 ADH1CP00326 375 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 CCDC175P0C221 793 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 ADH5P11766 374 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 TNNT1P13805 278 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 TCF4P15884 667 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 SGSHP51688 502 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 MS4A13Q5J8X5 152 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 SLFN11Q7Z7L1 901 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 C14orf80Q86SX3 495 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 UBALD2Q8IYN6 164 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 CFAP52Q8N1V2 620 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 KIAA1958Q8N8K9 716 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 DDI1Q8WTU0 396 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 AZIN2Q96A70 460 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 TMA16Q96EY4 203 aaKnown RBP14.39□□□□□ -0.11
TPM3-211ENST00000368531 MYEOVQ96EZ4 313 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 VANGL2Q9ULK5 521 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 USP18Q9UMW8 372 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 HS3ST4Q9Y661 456 aa14.39□□□□□ -0.11
TPM3-211ENST00000368531 A0A0A6YYK5 440 aaPredicted RBP14.38□□□□□ -0.11
TPM3-211ENST00000368531 F5H5T6 163 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 BUB1BO60566 1050 aaPredicted RBP14.38□□□□□ -0.11
TPM3-211ENST00000368531 TBL1XO60907 577 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 SRGAP2O75044 1071 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 MTA2O94776 668 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 CYBBP04839 570 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 GJA4P35212 333 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
TPM3-211ENST00000368531 ZXDAP98168 799 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 GAD2Q05329 585 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 AUHQ13825 339 aaKnown RBP14.38□□□□□ -0.11
TPM3-211ENST00000368531 ACAP1Q15027 740 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 FAM217AQ8IXS0 508 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 PYROXD2Q8N2H3 581 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 CPXM2Q8N436 756 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 NIPA2Q8N8Q9 360 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 DNASE1L2Q92874 299 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 P2RY11Q96G91 374 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 HAPLN3Q96S86 360 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 PRMT1Q99873 361 aaKnown RBP14.38□□□□□ -0.11
TPM3-211ENST00000368531 TMEM51Q9NW97 253 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 STOML2Q9UJZ1 356 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 GUCA1BQ9UMX6 200 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 PIAS3Q9Y6X2 628 aa14.38□□□□□ -0.11
TPM3-211ENST00000368531 SPECC1L-ADORA2AF8WAN1 911 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 DCXO43602 365 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 MOCS3O95396 460 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 TYRP14679 529 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 CD72P21854 359 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 IL1R2P27930 398 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 ARHGAP25P42331 645 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 SLC6A11P48066 632 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 MLLT6P55198 1093 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 TAS2R40P59535 323 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 TCEAL1Q15170 157 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 MLF2Q15773 248 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 SMTNL2Q2TAL5 461 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 MPPE1Q53F39 396 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 EFHC2Q5JST6 749 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 ZFYVE27Q5T4F4 411 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 ERMARDQ5T6L9 678 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 NAIF1Q69YI7 327 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 TPRG1Q6ZUI0 275 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 C12orf40Q86WS4 652 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 TPCN2Q8NHX9 752 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 HSPH1Q92598 858 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 IGSF8Q969P0 613 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 PRICKLE1Q96MT3 831 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 RPRD1AQ96P16 312 aaPredicted RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 NCAPGQ9BPX3 1015 aa14.37□□□□□ -0.11
TPM3-211ENST00000368531 SNRNP25Q9BV90 132 aaKnown RBP14.37□□□□□ -0.11
TPM3-211ENST00000368531 COL25A1Q9BXS0 654 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms