RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 TERB1Q8NA31 727 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 USP33Q8TEY7 942 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 DDI1Q8WTU0 396 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 ACDQ96AP0 544 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 PRICKLE1Q96MT3 831 aaPredicted RBP15.24■□□□□ 0.03
SF3B5-201ENST00000367569 CNTNAP3BQ96NU0 1288 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 SERPINB11Q96P15 392 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 SLC2A13Q96QE2 648 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 CNTNAP3Q9BZ76 1288 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 NUCKS1Q9H1E3 243 aaKnown RBP15.24■□□□□ 0.03
SF3B5-201ENST00000367569 DUSP15Q9H1R2 295 aaPredicted RBP15.24■□□□□ 0.03
SF3B5-201ENST00000367569 SMOC1Q9H4F8 434 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 METTL5Q9NRN9 209 aaKnown RBP15.24■□□□□ 0.03
SF3B5-201ENST00000367569 DDIT4Q9NX09 232 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 MARK1Q9P0L2 795 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 CALCOCO1Q9P1Z2 691 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 DEC1Q9P2X7 70 aa15.24■□□□□ 0.03
SF3B5-201ENST00000367569 MYO18AQ92614 2054 aaKnown RBP15.24■□□□□ 0.03
SF3B5-201ENST00000367569 TBC1D3BA6NDS4 549 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 HSF2BPO75031 334 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 KLF8O95600 359 aaPredicted RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 LSM8O95777 96 aaKnown RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 ADRB1P08588 477 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 DGKGP49619 791 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 SULT1E1P49888 294 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 SLC6A3Q01959 620 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 AASDHQ4L235 1098 aaPredicted RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 FAM133BQ5BKY9 247 aaKnown RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 PLA2G2CQ5R387 149 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 EGFLAMQ63HQ2 1017 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 TRNP1Q6NT89 227 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 CIR1Q86X95 450 aaPredicted RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 EMC1Q8N766 993 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 KIAA1958Q8N8K9 716 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 C12orf50Q8NA57 414 aaPredicted RBP15.23■□□□□ 0.03
SF3B5-201ENST00000367569 WFDC5Q8TCV5 224 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 STIM2Q9P246 746 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 EBF1Q9UH73 591 aa15.23■□□□□ 0.03
SF3B5-201ENST00000367569 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 PENKP01210 267 aaPredicted RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 CYP1A1P04798 512 aaPredicted RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 HNRNPLP14866 589 aaKnown RBP eCLIP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 HOXD9P28356 352 aaPredicted RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 FLT3P36888 993 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 UBASH3AP57075 661 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 NR1I3Q14994 352 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 ASIC2Q16515 512 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 GEN1Q17RS7 908 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 RAB6CQ53S08 254 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 EFHC1Q5JVL4 640 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 RAP1GAP2Q684P5 730 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 SLC26A9Q7LBE3 791 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 TXNDC5Q8NBS9 432 aaKnown RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 OLIG1Q8TAK6 271 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 XPO6Q96QU8 1125 aaKnown RBP15.22■□□□□ 0.03
SF3B5-201ENST00000367569 ACOX2Q99424 681 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 AGPAT1Q99943 283 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 TTYH3Q9C0H2 523 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 RAB6CQ9H0N0 254 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 TMPRSS4Q9NRS4 437 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 WDR35Q9P2L0 1181 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 HCN2Q9UL51 889 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 INVSQ9Y283 1065 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 TLR6Q9Y2C9 796 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 ZNF510Q9Y2H8 683 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 PCDHGA5Q9Y5G8 931 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 SNX10Q9Y5X0 201 aa15.22■□□□□ 0.03
SF3B5-201ENST00000367569 A0A1W2PQC6 194 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 SGK1O00141 431 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 TM4SF5O14894 197 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 ATMINO43313 823 aaPredicted RBP15.21■□□□□ 0.03
SF3B5-201ENST00000367569 ACSL4O60488 711 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 TBL1XO60907 577 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 IGLV3-25P01717 112 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 APOEP02649 317 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CYBBP04839 570 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 SKILP12757 684 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 FERP16591 822 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CHKAP35790 457 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 MPLP40238 635 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 EIF2DP41214 584 aaKnown RBP15.21■□□□□ 0.03
SF3B5-201ENST00000367569 GRIA2P42262 883 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 DGKEP52429 567 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 LIMK1P53667 647 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 RPS24P62847 133 aaKnown RBP15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CDK17Q00537 523 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CLEC16AQ2KHT3 1053 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CHSY1Q86X52 802 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 ZNF677Q86XU0 584 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 FAM217AQ8IXS0 508 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CFAP52Q8N1V2 620 aa15.21■□□□□ 0.03
SF3B5-201ENST00000367569 CPXM2Q8N436 756 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms