RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 THRAP10827 490 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 KHDC1Q4VXA5 237 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 MOV10Q9HCE1 1003 aaKnown RBP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 UVRAGQ9P2Y5 699 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TRPC5OSA6NMA1 111 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 AURKAO14965 403 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 GRSF1Q12849 480 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 ABRAXAS1Q6UWZ7 409 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
CDC42BPA-205ENST00000366769 SFNP31947 248 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 GLRBP48167 497 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 RRP1BQ14684 758 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 MACC1Q6ZN28 852 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 GSTCDQ8NEC7 633 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ATF5Q9Y2D1 282 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 FDFT1P37268 417 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 EPHX4Q8IUS5 362 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 FBXO36Q8NEA4 188 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 CDRT15Q96T59 188 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 RGS7P49802 495 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 CCNIQ14094 377 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 LACTB2Q53H82 288 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 DENND5AQ6IQ26 1287 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ANO7Q6IWH7 933 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 FAM45AQ8TCE6 357 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 PFASO15067 1338 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 LOC110117498-PIK3R3F6TDL0 507 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 TADA2AO75478 443 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 USP10Q14694 798 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 CA9Q16790 459 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 IPMKQ8NFU5 416 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 TCP10LQ8TDR4 215 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 IFNAR1P17181 557 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 MTMR1Q13613 665 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 MREGQ8N565 214 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 KRT35Q92764 455 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 THUMPD3Q9BV44 507 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 MAP3K20Q9NYL2 800 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 OR7A10O76100 309 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 MAGEA2P43356 314 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ALCAMQ13740 583 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 PAGE2Q7Z2X7 111 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 NT5DC4Q86YG4 428 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ZHX1-C8orf76Q96EF9 292 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 POLR3FQ9H1D9 316 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 KRCC1Q9NPI7 259 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 TBC1D14Q9P2M4 693 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 GIT1Q9Y2X7 761 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 C3orf70A6NLC5 250 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 TMCC2O75069 709 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SCGNO76038 276 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 CRYZL1O95825 349 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 VCLP18206 1134 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC1A6P48664 564 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 OTOAQ7RTW8 1153 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 ABCB11O95342 1321 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 KCNQ3O43525 872 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 RGS4P49798 205 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SULT1E1P49888 294 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 GNA12Q03113 381 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 GJB7Q6PEY0 223 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 UNKQ9C0B0 810 aaKnown RBP11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 SLC30A1Q9Y6M5 507 aa11.31□□□□□ -0.6
CDC42BPA-205ENST00000366769 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 COQ9O75208 318 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 RTN2O75298 545 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 CNTN1Q12860 1018 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 DDR2Q16832 855 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 IKBIPQ70UQ0 350 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 PDLIM1O00151 329 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 AXIN1O15169 862 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 ALADP13716 330 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 GTF2E2P29084 291 aaKnown RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 KCNK10P57789 538 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 C9orf16Q9BUW7 83 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 GRAP2O75791 330 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 TALDO1P37837 337 aa11.3□□□□□ -0.6
CDC42BPA-205ENST00000366769 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms