RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 B3GNT9Q6UX72 402 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 CLEC9AQ6UXN8 241 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 CREB3L2Q70SY1 520 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 H1FNTQ75WM6 255 aaPredicted RBP2.54□□□□□ -2
RNU6-238P-201ENST00000363313 P3H2Q8IVL5 708 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 CLIP4Q8N3C7 705 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 MBD3L2Q8NHZ7 208 aaPredicted RBP2.54□□□□□ -2
RNU6-238P-201ENST00000363313 PMM1Q92871 262 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 EME1Q96AY2 570 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 TRIM43Q96BQ3 446 aaPredicted RBP2.54□□□□□ -2
RNU6-238P-201ENST00000363313 RUNDC1Q96C34 613 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 C1QTNF5Q9BXJ0 243 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 TRIM2Q9C040 744 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 SAP30LQ9HAJ7 183 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 SPAG4Q9NPE6 437 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 UTS2RQ9UKP6 389 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 PCDHAC2Q9Y5I4 1007 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 KIF26BQ2KJY2 2108 aa2.54□□□□□ -2
RNU6-238P-201ENST00000363313 WASHC2CQ9Y4E1 1318 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 ISM1B1AKI9 464 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 BMPR1BO00238 502 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 RGS14O43566 566 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 RASSF9O75901 435 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 LCKP06239 509 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 ACVR2AP27037 513 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 HTR1BP28222 390 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 RAE1P78406 368 aaKnown RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 EEF1A2Q05639 463 aaKnown RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 DMWDQ09019 674 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 AASDHQ4L235 1098 aaPredicted RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 TDRD12Q587J7 1177 aaKnown RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 LRIG3Q6UXM1 1119 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 YAF2Q8IY57 180 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 GABPB2Q8TAK5 448 aaPredicted RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 IPCEF1Q8WWN9 437 aaPredicted RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 ASB12Q8WXK4 309 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 MAML1Q92585 1016 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 FAM227BQ96M60 508 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 SELENOOQ9BVL4 669 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 IGSF9Q9P2J2 1179 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 MAGED2Q9UNF1 606 aaPredicted RBP2.53□□□□□ -2
RNU6-238P-201ENST00000363313 ANKRD6Q9Y2G4 727 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 PTGDR2Q9Y5Y4 395 aa2.53□□□□□ -2
RNU6-238P-201ENST00000363313 DOCK7Q96N67 2140 aa2.53□□□□□ -2.01
RNU6-238P-201ENST00000363313 ZBTB11O95625 1053 aaPredicted RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 MAP4K4O95819 1239 aaPredicted RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 LCATP04180 440 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 RNF224P0DH78 156 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 DAOP14920 347 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 NCLP19338 710 aaKnown RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 NDUFS1P28331 727 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 HOXC13P31276 330 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 HTR7P34969 479 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 GLIPR1P48060 266 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 NOVP48745 357 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 ZP1P60852 638 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 ABATP80404 500 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 STK3Q13188 491 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 EGFLAMQ63HQ2 1017 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 PLEKHA7Q6IQ23 1121 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 SWSAP1Q6NVH7 229 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 Q6ZTK2 550 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 RHPN2Q8IUC4 686 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 LAS2Q8IYD9 372 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 GRAMD1CQ8IYS0 662 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 FSTL5Q8N475 847 aaPredicted RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 SUN3Q8TAQ9 357 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 DIS3LQ8TF46 1054 aaKnown RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 OVCA2Q8WZ82 227 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 PRR11Q96HE9 360 aaPredicted RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 SLC12A5Q9H2X9 1139 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 RETREG1Q9H6L5 497 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 MAP6D1Q9H9H5 199 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 TCF7L2Q9NQB0 619 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 TBC1D14Q9P2M4 693 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 GABBR1Q9UBS5 961 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 PLEKHB1Q9UF11 243 aaPredicted RBP2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 STAP2Q9UGK3 403 aa2.52□□□□□ -2.01
RNU6-238P-201ENST00000363313 PLSCR5A0PG75 271 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 ANTXRLA6NF34 631 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 RHODO00212 210 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 FRS3O43559 492 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 UBXN7O94888 489 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 TXNP10599 105 aaKnown RBP2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 KITP10721 976 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 BTF3P20290 206 aaKnown RBP2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 CIITAP33076 1130 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 ILF3Q12906 894 aaKnown RBP eCLIP2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 ANXA2RQ3ZCQ2 193 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 FNBP1LQ5T0N5 605 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 MANEALQ5VSG8 457 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 PLAG1Q6DJT9 500 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 GIMAP6Q6P9H5 292 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 SLC16A12Q6ZSM3 486 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 CADM3Q8N126 398 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 DBF4BQ8NFT6 615 aa2.51□□□□□ -2.01
RNU6-238P-201ENST00000363313 OR52L2PQ8NGH6 319 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms