RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CUL1Q13616 776 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 PPP1R7Q15435 360 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 TAF12Q16514 161 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 LEXMQ3ZCV2 418 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 TMCO3Q6UWJ1 677 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 MRPL43Q8N983 215 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 ATL2Q8NHH9 583 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 CASP10Q92851 521 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 HAUS1Q96CS2 278 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 CDK5RAP1Q96SZ6 601 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 PLEKHA4Q9H4M7 779 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM114A2Q9NRY5 505 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 INSL5Q9Y5Q6 135 aa14.34□□□□□ -0.11
PDLIM5-203ENST00000359265 DOCK4Q8N1I0 1966 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 BHMG1C9JSJ3 638 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 MCF2LO15068 1137 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 GRM6O15303 877 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 ZDHHC11BP0C7U3 371 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 KLRC2P26717 231 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 CCR1P32246 355 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 KCNJ1P48048 391 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 PGFP49763 221 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 VCPP55072 806 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 ERVFC1P60507 584 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 BYSLQ13895 437 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 PPP2R5DQ14738 602 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC9A4Q6AI14 798 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 CCDC149Q6ZUS6 474 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 RTL10Q7L3V2 364 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 TADA2BQ86TJ2 420 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 EIF1ADQ8N9N8 165 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 PCDH19Q8TAB3 1148 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC35B2Q8TB61 432 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 HNRNPLLQ8WVV9 542 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 P3H4Q92791 437 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 NKD2Q969F2 451 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 TRMT2BQ96GJ1 504 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 KLHL5Q96PQ7 755 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 EPAS1Q99814 870 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 ARFGAP3Q9NP61 516 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 FAM86C1Q9NVL1 165 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 OSER1Q9NX31 292 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 ARHGEF38Q9NXL2 777 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 UXTQ9UBK9 157 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 DNPEPQ9ULA0 475 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 TLR6Q9Y2C9 796 aa14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 HELZP42694 1942 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-203ENST00000359265 ZSCAN5CA6NGD5 496 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 EEF2KO00418 725 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 MSI1O43347 362 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 GLUD1P00367 558 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ITGAVP06756 1048 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC2A3P11169 496 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 GOT1P17174 413 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 IL4RP24394 825 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 DNAJB1P25685 340 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 TPI1P60174 286 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 EIF3EP60228 445 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 TWF1Q12792 350 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 EIF4EBP2Q13542 120 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 PTK6Q13882 451 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 NOMO1Q15155 1222 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ELMSAN1Q6PJG2 1045 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 CCNI2Q6ZMN8 369 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ITIH5Q86UX2 942 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 PYROXD2Q8N2H3 581 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 PQLC3Q8N755 202 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 CASKIN2Q8WXE0 1202 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 MYRFLQ96LU7 910 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 FAM118BQ9BPY3 351 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ERP44Q9BS26 406 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 DPH5Q9H2P9 285 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 TMPRSS4Q9NRS4 437 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 CWC15Q9P013 229 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 DPP7Q9UHL4 492 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 NUDT5Q9UKK9 219 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 ZNF148Q9UQR1 794 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 DRG1Q9Y295 367 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 TRIOO75962 3097 aa14.32□□□□□ -0.12
PDLIM5-203ENST00000359265 SHROOM3Q8TF72 1996 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 ESYT3A0FGR9 886 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HIDE1A8MVS5 230 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TGM5O43548 720 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 CREB3O43889 395 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TLR5O60602 858 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 APOEP02649 317 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PECAM1P16284 738 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HMGA1P17096 107 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms