RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 STKLD1Q8NE28 680 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 SLC2A14Q8TDB8 520 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 FAM149B1Q96BN6 582 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 PANX3Q96QZ0 392 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 UNKQ9C0B0 810 aaKnown RBP15.72■□□□□ 0.11
PTBP1-203ENST00000356948 CAB39LQ9H9S4 337 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 MTO1Q9Y2Z2 717 aaKnown RBP15.72■□□□□ 0.11
PTBP1-203ENST00000356948 I6L893 689 aaPredicted RBP15.72■□□□□ 0.11
PTBP1-203ENST00000356948 KRT37O76014 449 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 PRKCGP05129 697 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 GJA5P36382 358 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 CCNG1P51959 295 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 PDCD2Q16342 344 aaPredicted RBP15.72■□□□□ 0.11
PTBP1-203ENST00000356948 FAM47CQ5HY64 1035 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 MTHFD1LQ6UB35 978 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 PHACTR1Q9C0D0 580 aa15.72■□□□□ 0.11
PTBP1-203ENST00000356948 LOC100653049A0A140TA62 436 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 KRT34O76011 436 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 PSMG1O95456 288 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 PDE1CQ14123 709 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 PRAMEF19Q5SWL8 479 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 SYPL2Q5VXT5 272 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 OPTNQ96CV9 577 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 ZNF333Q96JL9 665 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 TTC1Q99614 292 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 KRT82Q9NSB4 513 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 A0A0G2JMZ2 1700 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 SOX4Q06945 474 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 NME3Q13232 169 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 N4BP2L1Q5TBK1 243 aaPredicted RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.71■□□□□ 0.113e-7■■■□□ 14.9
PTBP1-203ENST00000356948 PLD6Q8N2A8 252 aaKnown RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 CCNYQ8ND76 341 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 GSTCDQ8NEC7 633 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 SNRNP27Q8WVK2 155 aaKnown RBP15.71■□□□□ 0.11
PTBP1-203ENST00000356948 TMEM40Q8WWA1 233 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 EPAS1Q99814 870 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 SLC4A5Q9BY07 1137 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 CITO14578 2027 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 NUP205Q92621 2012 aa15.71■□□□□ 0.11
PTBP1-203ENST00000356948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.71■□□□□ 0.1
PTBP1-203ENST00000356948 H3BRB1 525 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 PDE5AO76074 875 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 PSMB4P28070 264 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 NUMBP49757 651 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 AFF1P51825 1210 aaKnown RBP15.71■□□□□ 0.1
PTBP1-203ENST00000356948 INHBEP58166 350 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 TTLL4Q14679 1199 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 BOLA3Q53S33 107 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 WASHC2DQ5SRD0 308 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 TMEM110Q86TL2 294 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 KBTBD7Q8WVZ9 684 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 AGAP2Q99490 1192 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 TUT1Q9H6E5 874 aaKnown RBP15.71■□□□□ 0.1
PTBP1-203ENST00000356948 UBP1Q9NZI7 540 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 SIRPGQ9P1W8 387 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 DNAJC16Q9Y2G8 782 aa15.71■□□□□ 0.1
PTBP1-203ENST00000356948 HBS1LQ9Y450 684 aaKnown RBP15.71■□□□□ 0.1
PTBP1-203ENST00000356948 BCLAF3A2AJT9 711 aaKnown RBP15.7■□□□□ 0.1
PTBP1-203ENST00000356948 C10orf107Q8IVU9 208 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 LINC01465Q8N7H1 131 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 ARNTL2Q8WYA1 636 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 ASB7Q9H672 318 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 DCLRE1BQ9H816 532 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 CYP3A43Q9HB55 503 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 SYBUQ9NX95 663 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 SLC7A8Q9UHI5 535 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 PPM1HQ9ULR3 514 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 FAM159BA6NKW6 160 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 MEIS3P2A8K0S8 358 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
PTBP1-203ENST00000356948 BPGMP07738 259 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 MAGEA3P43357 314 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 ARHGAP22Q7Z5H3 698 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 COLGALT1Q8NBJ5 622 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 GSDMBQ8TAX9 411 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 CCDC124Q96CT7 223 aaKnown RBP15.7■□□□□ 0.1
PTBP1-203ENST00000356948 FCRL3Q96P31 734 aaPredicted RBP15.7■□□□□ 0.1
PTBP1-203ENST00000356948 CYP4F11Q9HBI6 524 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.7■□□□□ 0.13e-7■■□□□ 11.9
PTBP1-203ENST00000356948 TMEM216Q9P0N5 145 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 LOC285556D6RIA3 1793 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 ATP6V1C1P21283 382 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 PPP2R5DQ14738 602 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 DCAF6Q58WW2 860 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 RIPOR1Q6ZS17 1223 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 TRIM74Q86UV6 250 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 TRIM73Q86UV7 250 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 DEFB106AQ8N104 65 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 ATP2A3Q93084 1043 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 RTP4Q96DX8 246 aa15.7■□□□□ 0.1
PTBP1-203ENST00000356948 A6NJR5 290 aa15.69■□□□□ 0.1
PTBP1-203ENST00000356948 I3L4J1 428 aa15.69■□□□□ 0.1
PTBP1-203ENST00000356948 DNAJC6O75061 913 aa15.69■□□□□ 0.1
PTBP1-203ENST00000356948 HEATR6Q6AI08 1181 aaKnown RBP15.69■□□□□ 0.1
PTBP1-203ENST00000356948 CCNJLQ8IV13 435 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms