RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 LIASO43766 372 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 MOCS2O96007 188 aaPredicted RBP18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 APOC2P02655 101 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 HMBSP08397 361 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 RBM10P98175 930 aaKnown RBP18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 OTUD4Q01804 1114 aaKnown RBP18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 TMCO3Q6UWJ1 677 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 RTL10Q7L3V2 364 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 JAMLQ86YT9 394 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 ACTL9Q8TC94 416 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 FRMD8P1Q9BZ68 369 aaPredicted RBP18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 HCFC1R1Q9NWW0 138 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 DNPEPQ9ULA0 475 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 NEU3Q9UQ49 428 aa18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 UTP11Q9Y3A2 253 aaKnown RBP18.77■□□□□ 0.6
SMARCD3-202ENST00000356800 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 EEF2KO00418 725 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 LRIG2O94898 1065 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC2A3P11169 496 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 GABRR2P28476 465 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 KCNQ1P51787 676 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 RING1Q06587 406 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 MAP9Q49MG5 647 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 PABPC1LQ4VXU2 614 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 BEND6Q5SZJ8 279 aaPredicted RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 PIK3R6Q5UE93 754 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 RFX8Q6ZV50 586 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TADA2BQ86TJ2 420 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 CCDC105Q8IYK2 499 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 ELMOD1Q8N336 334 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TTC13Q8NBP0 860 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC35B2Q8TB61 432 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TIFAQ96CG3 184 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC22A12Q96S37 553 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 CORO1BQ9BR76 489 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 SIK2Q9H0K1 926 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 RAB17Q9H0T7 212 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 HBS1LQ9Y450 684 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 HS3ST4Q9Y661 456 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 DOCK4Q8N1I0 1966 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 HOXA9P31269 272 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 HCAR3P49019 387 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 CYP4F8P98187 520 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 CUL1Q13616 776 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 DUSP6Q16828 381 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 MANEALQ5VSG8 457 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 NCBP2-AS2Q69YL0 99 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TXNDC8Q6A555 127 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 C1orf228Q6PIY5 440 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 SYDE1Q6ZW31 735 aaPredicted RBP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 ATL2Q8NHH9 583 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 ERP44Q9BS26 406 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 TLE6Q9H808 572 aa18.76■□□□□ 0.59
SMARCD3-202ENST00000356800 DCLK1O15075 740 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 ECEL1O95672 775 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 APOEP02649 317 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 TGM2P21980 687 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 CCR2P41597 374 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 NRIP1P48552 1158 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 RGS19P49795 217 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 KPNA1P52294 538 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 EPHA5P54756 1037 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 DRG2P55039 364 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 VCPP55072 806 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 TPI1P60174 286 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 SMAD3P84022 425 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 SLC10A2Q12908 348 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 NOMO1Q15155 1222 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 OASLQ15646 514 aaKnown RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 CHRDL2Q6WN34 429 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 C14orf80Q86SX3 495 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 GRK7Q8WTQ7 553 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 CASKIN2Q8WXE0 1202 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 NKD2Q969F2 451 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 CYP2S1Q96SQ9 504 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 TRIM51Q9BSJ1 452 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 KLF16Q9BXK1 252 aaPredicted RBP18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 NACA2Q9H009 215 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 ASAH2Q9NR71 780 aa18.75■□□□□ 0.59
SMARCD3-202ENST00000356800 ESYT3A0FGR9 886 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 OLFM2O95897 454 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 HNRNPA1P09651 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 MYBL2P10244 700 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 MYL4P12829 197 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 GJA1P17302 382 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 MLLT6P55198 1093 aaPredicted RBP18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 GBE1Q04446 702 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 BYSLQ13895 437 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF697Q5TEC3 545 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 DUPD1Q68J44 220 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 ZNF683Q8IZ20 524 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 VN1R2Q8NFZ6 395 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 P3H4Q92791 437 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 ZFRQ96KR1 1074 aaKnown RBP18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 BTN2A3PQ96KV6 586 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 C1orf74Q96LT6 269 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 EPAS1Q99814 870 aa18.74■□□□□ 0.59
SMARCD3-202ENST00000356800 TRPC7Q9HCX4 862 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms