RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZC3H18Q86VM9 953 aaKnown RBP14.09□□□□□ -0.15
HOXA1-202ENST00000355633 ALLCQ8N6M5 410 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 CCDC89Q8N998 374 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 KREMEN2Q8NCW0 462 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 SIK2Q9H0K1 926 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 ETNK2Q9NVF9 386 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 NEU2Q9Y3R4 380 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 ASB3Q9Y575 518 aa14.09□□□□□ -0.15
HOXA1-202ENST00000355633 H7C0C1 242 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 LRIG2O94898 1065 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 KRT14P02533 472 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 C8AP07357 584 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 ATP5C1P36542 298 aaKnown RBP14.08□□□□□ -0.15
HOXA1-202ENST00000355633 GGCXP38435 758 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 ATP5OP48047 213 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 AENQ8WTP8 325 aaKnown RBP14.08□□□□□ -0.15
HOXA1-202ENST00000355633 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.08□□□□□ -0.15
HOXA1-202ENST00000355633 NACA2Q9H009 215 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.15
HOXA1-202ENST00000355633 DCLK1O15075 740 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 MAP3K6O95382 1288 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 ERCC2P18074 760 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 EPHB2P29323 1055 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 IRS1P35568 1242 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 RPL21P46778 160 aaKnown RBP14.08□□□□□ -0.16
HOXA1-202ENST00000355633 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
HOXA1-202ENST00000355633 ERVK-21P61565 698 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 GBE1Q04446 702 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.16
HOXA1-202ENST00000355633 ATP6V0D2Q8N8Y2 350 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 CCHCR1Q8TD31 782 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 C10orf88Q9H8K7 445 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 SLC12A6Q9UHW9 1150 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 XPO7Q9UIA9 1087 aaKnown RBP14.08□□□□□ -0.16
HOXA1-202ENST00000355633 YBX2Q9Y2T7 364 aaKnown RBP14.08□□□□□ -0.16
HOXA1-202ENST00000355633 MFHAS1Q9Y4C4 1052 aa14.08□□□□□ -0.16
HOXA1-202ENST00000355633 IGLV3-27P01718 113 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 HMBSP08397 361 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ECHS1P30084 290 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 VPS41P49754 854 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 TUBP50607 506 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 CLCN4P51793 760 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 RING1Q06587 406 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 SLC10A2Q12908 348 aaPredicted RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 CAMK1Q14012 370 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 PAFAH1B3Q15102 231 aaKnown RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 EMBQ6PCB8 327 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 BZW1Q7L1Q6 419 aaKnown RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ZNF334Q9HCZ1 680 aaPredicted RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 GRHL1Q9NZI5 618 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 DTLQ9NZJ0 730 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 HBS1LQ9Y450 684 aaKnown RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 HS3ST4Q9Y661 456 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ANAPC1Q9H1A4 1944 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 MTCL1Q9Y4B5 1905 aaKnown RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 COCHO43405 550 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 MFSD11O43934 449 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 IFNB1P01574 187 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 SRGAP2BP0DMP2 458 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 STIP1P31948 543 aaKnown RBP14.07□□□□□ -0.16
HOXA1-202ENST00000355633 HTR7P34969 479 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ADCY8P40145 1251 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 PBX2P40425 430 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 CALCOCO2Q13137 446 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 XRCC4Q13426 336 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 GPM6BQ13491 265 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 PRUNE1Q86TP1 453 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 UNC45BQ8IWX7 931 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ELMOD1Q8N336 334 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 GLIS1Q8NBF1 620 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 SNF8Q96H20 258 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 BTN2A3PQ96KV6 586 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 C1orf74Q96LT6 269 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 PCDH9Q9HC56 1237 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
HOXA1-202ENST00000355633 H3BNC9 293 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 ZSCAN5DPP0CG00 497 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 ETS1P14921 441 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 TNNT3P45378 269 aaPredicted RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 PLTPP55058 493 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 GDF10P55107 478 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 MLLT6P55198 1093 aaPredicted RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 NRG1Q02297 640 aaPredicted RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 PABPC1LQ4VXU2 614 aaKnown RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 MANEALQ5VSG8 457 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 NUGGCQ68CJ6 796 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 PDE12Q6L8Q7 609 aaKnown RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 RWDD4Q6NW29 188 aaKnown RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 PDZD4Q76G19 769 aaPredicted RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 B4GALNT4Q76KP1 1039 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 TMEM150AQ86TG1 271 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 CDKL3Q8IVW4 592 aaPredicted RBP14.06□□□□□ -0.16
HOXA1-202ENST00000355633 TBC1D31Q96DN5 1066 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 GDAP1L1Q96MZ0 367 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 IL21Q9HBE4 155 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 WHRNQ9P202 907 aa14.06□□□□□ -0.16
HOXA1-202ENST00000355633 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms