RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 ATG4AQ8WYN0 398 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 UBXN4Q92575 508 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 MRPS31Q92665 395 aaKnown RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 BTN2A3PQ96KV6 586 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 LRRC1Q9BTT6 524 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 NACA2Q9H009 215 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 SLITRK6Q9H5Y7 841 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 PRDM16Q9HAZ2 1276 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 ARHGEF4Q9NR80 690 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 HOMER3Q9NSC5 361 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.1□□□□□ -1.11
TMC1-202ENST00000340019 PCYOX1Q9UHG3 505 aa8.1□□□□□ -1.11
TMC1-202ENST00000340019 V9GYY5 206 aaPredicted RBP8.1□□□□□ -1.11
TMC1-202ENST00000340019 EEF2KO00418 725 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 APOL1O14791 398 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 DCLK1O15075 740 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 XYLBO75191 536 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 APOEP02649 317 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 RHOP08100 348 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 MYL4P12829 197 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 PECAM1P16284 738 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 TGM2P21980 687 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 FNTAP49354 379 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 DYNLT1P63172 113 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ZXDBP98169 803 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SLC5A9Q2M3M2 681 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 MS4A13Q5J8X5 152 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 TEX35Q5T0J7 233 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ZNF697Q5TEC3 545 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 NUGGCQ68CJ6 796 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 NCBP2-AS2Q69YL0 99 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SLC35B2Q8TB61 432 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SHKBP1Q8TBC3 707 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 MAGOHBQ96A72 148 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 PLD4Q96BZ4 506 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 CYP2S1Q96SQ9 504 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 EPAS1Q99814 870 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 ATXN3LQ9H3M9 355 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 SAE1Q9UBE0 346 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 AMACRQ9UHK6 382 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 LIASO43766 372 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 STC2O76061 302 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 GLP2RO95838 553 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 GJA1P17302 382 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 HDCP19113 662 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 AMPD1P23109 780 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 HTR7P34969 479 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 COILP38432 576 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 GGCXP38435 758 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SLC7A9P82251 487 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 HYAL1Q12794 435 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 GLE1Q53GS7 698 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 STXBP5Q5T5C0 1151 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ACBD5Q5T8D3 534 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 CCDC137Q6PK04 289 aaKnown RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 PDZD4Q76G19 769 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 UNC45BQ8IWX7 931 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ARL14EPQ8N8R7 260 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 ATP6V0D2Q8N8Y2 350 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 TTC13Q8NBP0 860 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ACTL9Q8TC94 416 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SLCO2A1Q92959 643 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 NKD2Q969F2 451 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 AZIN2Q96A70 460 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 TCEAL4Q96EI5 215 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 GCNAQ96QF7 691 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SLC46A2Q9BY10 475 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 FRMD8P1Q9BZ68 369 aaPredicted RBP8.09□□□□□ -1.11
TMC1-202ENST00000340019 ANKZF1Q9H8Y5 726 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 SFXN1Q9H9B4 322 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 TRPC7Q9HCX4 862 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 GKN1Q9NS71 199 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 ETNK2Q9NVF9 386 aa8.09□□□□□ -1.11
TMC1-202ENST00000340019 EYSQ5T1H1 3165 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 IGLV3-10A0A075B6K4 115 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 SOBPA7XYQ1 873 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 RAD51CO43502 376 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 GREM1O60565 184 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 KLKB1P03952 638 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 HMBSP08397 361 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 ZFXP17010 805 aaPredicted RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 DDX6P26196 483 aaKnown RBP eCLIP8.09□□□□□ -1.12
TMC1-202ENST00000340019 PTGIRP43119 386 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 TPI1P60174 286 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 OTUD4Q01804 1114 aaKnown RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 PAFAH1B3Q15102 231 aaKnown RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 NOMO1Q15155 1222 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 OASLQ15646 514 aaKnown RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 NADSYN1Q6IA69 706 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 NPNTQ6UXI9 565 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 GRASPQ7Z6J2 395 aaPredicted RBP8.09□□□□□ -1.12
TMC1-202ENST00000340019 C14orf80Q86SX3 495 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 MAB21L3Q8N8X9 362 aa8.09□□□□□ -1.12
TMC1-202ENST00000340019 PPP2R3CQ969Q6 453 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms