RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ZNF37AP17032 561 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-201ENST00000338508 OLFML2AQ68BL7 652 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 CCDC126Q96EE4 140 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 MYL12BO14950 172 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 ZBTB22O15209 634 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 FAM86B2P0C5J1 330 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 LY6KQ17RY6 165 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 ZBTB49Q6ZSB9 765 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 RELTQ969Z4 430 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 TNKS2Q9H2K2 1166 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 SLC25A12O75746 678 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 KIAA0408Q6ZU52 694 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 NOL6Q9H6R4 1146 aaKnown RBP12.04□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM138Q9NPI0 162 aa12.04□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ERMARDQ5T6L9 678 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ULK3Q6PHR2 472 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 BHLHE41Q9C0J9 482 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 LOC100506127A0A0U1RQW1 187 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 KHDRBS3O75525 346 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 TAL1P17542 331 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ARF4P18085 180 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CYP4F2P78329 520 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CYP4F3Q08477 520 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 POMZP3Q6PJE2 187 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 SLC47A2Q86VL8 602 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 DSELQ8IZU8 1212 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 RUSC1Q9BVN2 902 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 LRRC40Q9H9A6 602 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 UBAP1Q9NZ09 502 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 POLD2P49005 469 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CENPCQ03188 943 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 FBXL19Q6PCT2 694 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 SMYD1Q8NB12 490 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CHST13Q8NET6 341 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 PRKD2Q9BZL6 878 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 MID1IP1Q9NPA3 183 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ADGRL2O95490 1459 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 EFCAB10A6NFE3 127 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 FAM124AQ86V42 546 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 PARP8Q8N3A8 854 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 KDM5CP41229 1560 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 BCLAF3A2AJT9 711 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 PSTPIP1O43586 416 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 TIMM44O43615 452 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 GHRP10912 638 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 FOXO4P98177 505 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 LRRC34Q8IZ02 419 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 SYTL5Q8TDW5 730 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 TMEM120AQ9BXJ8 343 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ABCG8Q9H221 673 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 OPLAHO14841 1288 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 POLR2EP19388 210 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 HSD17B3P37058 310 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 CRATP43155 626 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 BCAT1P54687 386 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 TTC23Q5W5X9 447 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 ZNF280DQ6N043 979 aa12.03□□□□□ -0.48
SHANK2-201ENST00000338508 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
SHANK2-201ENST00000338508 GCLCP48506 637 aaPredicted RBP12.02□□□□□ -0.48
SHANK2-201ENST00000338508 LRIG3Q6UXM1 1119 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 CYP2R1Q6VVX0 501 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 MTDHQ86UE4 582 aaKnown RBP12.02□□□□□ -0.48
SHANK2-201ENST00000338508 LRRC6Q86X45 466 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 PROX1Q92786 737 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 LRRC39Q96DD0 335 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 RNF145Q96MT1 663 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 DCUN1D5Q9BTE7 237 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 SLC40A1Q9NP59 571 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 SAE1Q9UBE0 346 aaPredicted RBP12.02□□□□□ -0.48
SHANK2-201ENST00000338508 A0A087WZ62 844 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 RAD51BO15315 384 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 PRODHO43272 600 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 NTRK1P04629 796 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 TPBGLP0DKB5 382 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 ADRA2BP18089 450 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 TUBP50607 506 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 TBX4P57082 545 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 NUP107P57740 925 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 FAM98BQ52LJ0 330 aaKnown RBP12.02□□□□□ -0.48
SHANK2-201ENST00000338508 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.48
SHANK2-201ENST00000338508 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 ZNF354BQ96LW1 612 aa12.02□□□□□ -0.48
SHANK2-201ENST00000338508 FDXACB1Q9BRP7 624 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms