RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NDUFS2O75306 463 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 ZNF217O75362 1048 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 GNA14O95837 355 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 IGLV3-27P01718 113 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 RPS24P62847 133 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 DUOXA1Q1HG43 343 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 SPDYCQ5MJ68 293 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 MMS22LQ6ZRQ5 1243 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 DQX1Q8TE96 717 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 IRGQQ8WZA9 623 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 SIPA1Q96FS4 1042 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 SLC2A11Q9BYW1 496 aa13.91□□□□□ -0.18
NUDCD3-201ENST00000338427 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 PAPSS1O43252 624 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 THAP12O43422 761 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 SYNCRIPO60506 623 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 PNMA6AP0CW24 399 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 CD6P30203 668 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 RPL34P49207 117 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 TPMTP51580 245 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 FAM193AP78312 1265 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 STARD3Q14849 445 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 PTPRNQ16849 979 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 FSCBQ5H9T9 825 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 MBLAC2Q68D91 279 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 SERPINA13PQ6UXR4 307 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 KIAA0907Q7Z7F0 614 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 SLC4A5Q9BY07 1137 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 NUCKS1Q9H1E3 243 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 CAPN10Q9HC96 672 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 RWDD2AQ9UIY3 292 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 GGA2Q9UJY4 613 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 INTS6Q9UL03 887 aaKnown RBP13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 SLCO1B1Q9Y6L6 691 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 NUMA1Q14980 2115 aa13.9□□□□□ -0.18
NUDCD3-201ENST00000338427 SPAARA0A1B0GVQ0 90 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PCNX2A6NKB5 2137 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 E5RJQ4 531 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 TIMM44O43615 452 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 SERPINF2P08697 491 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 UBE2HP62256 183 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 ARID5AQ03989 594 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 GFPT1Q06210 699 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 FOXC1Q12948 553 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 STILQ15468 1287 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 FNDC3BQ53EP0 1204 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 ZC3H12AQ5D1E8 599 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 TRIM65Q6PJ69 517 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PRCCQ92733 491 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 SLC39A13Q96H72 371 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PRICKLE1Q96MT3 831 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 CAMK1GQ96NX5 476 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 MIR1-1HGQ9H1L0 117 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 TMEM245Q9H330 911 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PRSS16Q9NQE7 514 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 ANGPTL2Q9UKU9 493 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 PLA2G4CQ9UP65 541 aa13.89□□□□□ -0.19
NUDCD3-201ENST00000338427 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 GRAP2O75791 330 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 FBXO21O94952 628 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 PON1P27169 355 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 GNA15P30679 374 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 ACSL1P33121 698 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 CTSOP43234 321 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 SLC11A2P49281 568 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 ZNF252P-AS1Q0IIN9 211 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 LMAN2Q12907 356 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 PLEKHG6Q3KR16 790 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 DCAF6Q58WW2 860 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 DCAF12L1Q5VU92 463 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 DPY19L2P1Q6NXN4 242 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 METTL3Q86U44 580 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 MINDY1Q8N5J2 469 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 OR2T3Q8NH03 318 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 SIX2Q9NPC8 291 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 ACACBO00763 2458 aa13.88□□□□□ -0.19
NUDCD3-201ENST00000338427 SYNJ2BP-COX16A0A087WUM0 186 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 METTL12A8MUP2 240 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 FGFR1OPO95684 399 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 LATS1O95835 1130 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CEACAM1P13688 526 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CD59P13987 128 aa13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 POLR2EP19388 210 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-201ENST00000338427 MTIF2P46199 727 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms