RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
EPHA3-201ENST00000336596 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
EPHA3-201ENST00000336596 FAIM2Q9BWQ8 316 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 SLC32A1Q9H598 525 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 ZFP14Q9HCL3 533 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 MARCH2Q9P0N8 246 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 SPASTQ9UBP0 616 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 PSME2Q9UL46 239 aa7.54□□□□□ -1.2
EPHA3-201ENST00000336596 DNM1LO00429 736 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KPNA3O00505 521 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 VPS4BO75351 444 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 GPC1P35052 558 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CASRP41180 1078 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 RPL21P46778 160 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PMS2P54278 862 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C1QBPQ07021 282 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 FUT2Q10981 343 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SLC18A3Q16572 532 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ESRP1Q6NXG1 681 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PALB2Q86YC2 1186 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 TSTD1Q8NFU3 115 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 BTBD6Q96KE9 485 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SENP8Q96LD8 212 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 HSFY1Q96LI6 401 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ASB2Q96Q27 587 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CBWD1Q9BRT8 395 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 XPO7Q9UIA9 1087 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SPTLC1O15269 473 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KATNA1O75449 491 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 WEE2P0C1S8 567 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KCNA10Q16322 511 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 HABP4Q5JVS0 413 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C11orf88Q6PI97 169 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CCDC137Q6PK04 289 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C16orf62Q7Z3J2 963 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CBWD2Q8IUF1 395 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 COLGALT2Q8IYK4 626 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CCDC185Q8N715 623 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CDCA3Q99618 268 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ARHGAP39Q9C0H5 1083 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 POLR1EQ9GZS1 481 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SCHIP1Q9P0W5 487 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ENOPH1Q9UHY7 261 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 AP4E1Q9UPM8 1137 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PCDHA2Q9Y5H9 948 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 F8W810 466 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 TBC1D4O60343 1298 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 TADA3O75528 432 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 BAG2O95816 211 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 GZMAP12544 262 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PCSK2P16519 638 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ITGB5P18084 799 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CXCR5P32302 372 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CHI3L1P36222 383 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KCNK10P57789 538 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ZC3H18Q86VM9 953 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 GPR135Q8IZ08 494 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SCAIQ8N9R8 606 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 BLOC1S5Q8TDH9 187 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 BBS4Q96RK4 519 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 GNPTGQ9UJJ9 305 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CDYLQ9Y232 598 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 RASA4BC9J798 803 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 EIF3HO15372 352 aaKnown RBP eCLIP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 RASA4O43374 803 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KRT6AP02538 564 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KRT6BP04259 564 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SLC9A1P19634 815 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 TYMPP19971 482 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KRT6CP48668 564 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SP2Q02086 613 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SLC20A2Q08357 652 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PDGFRLQ15198 375 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ERMARDQ5T6L9 678 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 GALNT18Q6P9A2 607 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C10orf53Q8N6V4 93 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 HAS1Q92839 578 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PLD4Q96BZ4 506 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 STAMBPL1Q96FJ0 436 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 SUFUQ9UMX1 484 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ST3GAL5Q9UNP4 418 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 TBC1D30Q9Y2I9 924 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 MEFVO15553 781 aaPredicted RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 CATP04040 527 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ATP6V1C1P21283 382 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 YWHAZP63104 245 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 INSCQ1MX18 579 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ZBTB41Q5SVQ8 909 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 C16orf89Q6UX73 402 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 COG1Q8WTW3 980 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 IRGQQ8WZA9 623 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 USP7Q93009 1102 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 POP5Q969H6 163 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 PI4K2AQ9BTU6 479 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 STRADBQ9C0K7 418 aa7.53□□□□□ -1.2
EPHA3-201ENST00000336596 LMAN2LQ9H0V9 348 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms