RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 C10orf71Q711Q0 1435 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 CITO14578 2027 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 XPO1O14980 1071 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 HNRNPRO43390 633 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 HCRTO43612 131 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ASMTLO95671 621 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 FESP07332 822 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ELNP15502 786 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ZFXP17010 805 aaPredicted RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 MX2P20592 715 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 KCNA4P22459 653 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 KDELR1P24390 212 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 WEE1P30291 646 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 RGS2P41220 211 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 BCAT1P54687 386 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 RPL10AP62906 217 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ACAP1Q15027 740 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 PDK1Q15118 436 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 STILQ15468 1287 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 GALNTL6Q49A17 601 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 HSP90AA5PQ58FG0 334 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 CDCA2Q69YH5 1023 aaPredicted RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 RIPOR1Q6ZS17 1223 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 FAM183BPQ6ZVS7 135 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 GSTCDQ8NEC7 633 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 SH3TC2Q8TF17 1288 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 SEC14L1Q92503 715 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 SENP8Q96LD8 212 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 MRPL45Q9BRJ2 306 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 HERPUD2Q9BSE4 406 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 EIF2AQ9BY44 585 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ASB7Q9H672 318 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 DHX33Q9H6R0 707 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 TAS2R1Q9NYW7 299 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 AK5Q9Y6K8 562 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 MYPNQ86TC9 1320 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 PRRG1O14668 218 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 PQBP1O60828 265 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 FAM155BO75949 473 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 C4BPAP04003 597 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 POLBP06746 335 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 MCF2P10911 925 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
HMG20A-201ENST00000336216 CNGA3Q16281 694 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 CGB2Q6NT52 195 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 POLNQ7Z5Q5 900 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 DDIASQ8IXT1 998 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 TXLNGYQ9BZA5 131 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 IL1RL2Q9HB29 575 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 HMGXB4Q9UGU5 601 aa6.66□□□□□ -1.34
HMG20A-201ENST00000336216 ATP8B3O60423 1300 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 RGPD3A6NKT7 1758 aaPredicted RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 RGPD4Q7Z3J3 1758 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 CNTNAP1P78357 1384 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 A8MX80 341 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 PEX1O43933 1283 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 SMIM10L2AP0DMW4 78 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 SMIM10L2BP0DMW5 78 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 ENO3P13929 434 aaPredicted RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 GFAPP14136 432 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 RPL22P35268 128 aaKnown RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 SKIV2L2P42285 1042 aaKnown RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 BRCC3P46736 316 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 PLK1P53350 603 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 NME5P56597 212 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 STX1BP61266 288 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 PEX6Q13608 980 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 GALNT15Q8N3T1 639 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 ZCCHC9Q8N567 271 aaKnown RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF333Q96JL9 665 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 OLFM3Q96PB7 478 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 TMEM109Q9BVC6 243 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF518BQ9C0D4 1074 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 TSPYL2Q9H2G4 693 aaPredicted RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 CCDC134Q9H6E4 229 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 XPNPEP3Q9NQH7 507 aa6.65□□□□□ -1.34
HMG20A-201ENST00000336216 UTP6Q9NYH9 597 aaKnown RBP6.65□□□□□ -1.34
HMG20A-201ENST00000336216 WDR27A2RRH5 827 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 EDIL3O43854 480 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 CYP1A2P05177 515 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 GOT1P17174 413 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MMP8P22894 467 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MGAT1P26572 445 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PSEN2P49810 448 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 CDK16Q00536 496 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 KYAT1Q16773 422 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 OVOS1Q6IE37 1185 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 KLC3Q6P597 504 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 RNF168Q8IYW5 571 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ARHGAP18Q8N392 663 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SLC7A6OSQ96CW6 309 aaPredicted RBP6.65□□□□□ -1.35
HMG20A-201ENST00000336216 ELMO2Q96JJ3 720 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MBOAT7Q96N66 472 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 SLITRK1Q96PX8 696 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PHF12Q96QT6 1004 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 TUBGCP5Q96RT8 1024 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.35
HMG20A-201ENST00000336216 MROH7Q68CQ1 1323 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms