RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 RNF103O00237 685 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 MAP3K13O43283 966 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 KITP10721 976 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 LILRA4P59901 499 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 LRRC14Q15048 493 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ANKRD20A2Q5SQ80 823 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 BEND6Q5SZJ8 279 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ANKRD20A1Q5TYW2 823 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 SZRD1Q7Z422 152 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 NFKBIZQ9BYH8 718 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 DNALI1O14645 258 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 PRPF4O43172 522 aaKnown RBP eCLIP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 STMN1P16949 149 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 SPIRE1Q08AE8 756 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 DUSP4Q13115 394 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 MTM1Q13496 603 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 HIST2H2ACQ16777 129 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 C15orf59Q2T9L4 293 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 ARMC12Q5T9G4 340 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 MROH9Q5TGP6 573 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 HIST2H2AA3Q6FI13 130 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 IRF2BP2Q7Z5L9 587 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 IRF2BP1Q8IU81 584 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 LPCAT1Q8NF37 534 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 LNX1Q8TBB1 728 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 LRRC39Q96DD0 335 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 PPP1R16AQ96I34 528 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 APOL2Q9BQE5 337 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 C11orf84Q9BUA3 381 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 SNRNP25Q9BV90 132 aaKnown RBP11.52□□□□□ -0.57
POLR1B-202ENST00000333990 SLC24A2Q9UI40 661 aa11.52□□□□□ -0.57
POLR1B-202ENST00000333990 KCNK1O00180 336 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 O00370 1275 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PFKMP08237 780 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 MMP8P22894 467 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 GABRR2P28476 465 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SERPINB8P50452 374 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SNRPD1P62314 119 aaKnown RBP11.51□□□□□ -0.57
POLR1B-202ENST00000333990 FPGSQ05932 587 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SGCGQ13326 291 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 MPP3Q13368 585 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SLC10A6Q3KNW5 377 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PLPP4Q5VZY2 271 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 MAMDC4Q6UXC1 1216 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 DNAAF5Q86Y56 855 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 C12orf29Q8N999 325 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 IRGQQ8WZA9 623 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SEMA4DQ92854 862 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 FGFBP2Q9BYJ0 223 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 ACP6Q9NPH0 428 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 TBC1D14Q9P2M4 693 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 EPHB6O15197 1021 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 GYG2O15488 501 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PPP1R37O75864 691 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PCDH8O95206 1070 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 FAM163BP0C2L3 166 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RFC2P35250 354 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 LIG3P49916 1009 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RAP1GAP2Q684P5 730 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SLC26A11Q86WA9 606 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 ECHDC2Q86YB7 292 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 KREMEN1Q96MU8 473 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RIC8BQ9NVN3 520 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 DDR2Q16832 855 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SLC35G1Q2M3R5 365 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SLC45A4Q5BKX6 768 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 MYO1HQ8N1T3 1032 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 CASKIN2Q8WXE0 1202 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RNF186Q9NXI6 227 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RAD54BQ9Y620 910 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 KPNA3O00505 521 aaPredicted RBP11.51□□□□□ -0.57
POLR1B-202ENST00000333990 SNAI1O95863 264 aaPredicted RBP11.51□□□□□ -0.57
POLR1B-202ENST00000333990 NOVP48745 357 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PARP6Q2NL67 630 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 CCDC33Q8N5R6 958 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 CXorf38Q8TB03 319 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 FUBP3Q96I24 572 aaKnown RBP eCLIP11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RNF157Q96PX1 679 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 RAD18Q9NS91 495 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 DCDC2Q9UHG0 476 aa11.51□□□□□ -0.57
POLR1B-202ENST00000333990 PMM2O15305 246 aa11.5□□□□□ -0.57
POLR1B-202ENST00000333990 CST3P01034 146 aaPredicted RBP11.5□□□□□ -0.57
POLR1B-202ENST00000333990 CLCNKBP51801 687 aa11.5□□□□□ -0.57
POLR1B-202ENST00000333990 SP2Q02086 613 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms