RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DUPD1Q68J44 220 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 LGI2Q8N0V4 545 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TEX9Q8N6V9 391 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 FBXO44Q9H4M3 255 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ST3GAL5Q9UNP4 418 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ACOT9Q9Y305 439 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 SLC15A5A6NIM6 579 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 PFDN1O60925 122 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 PBLDP30039 288 aaPredicted RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 CDH17Q12864 832 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TBL1YQ9BQ87 522 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 AAASQ9NRG9 546 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 hCG_1818297A0A087WSY0 165 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TTLL13PA6NNM8 815 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 MEI4A8MW99 385 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 CNTFP26441 200 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 NOS2P35228 1153 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 EPHB3P54753 998 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 SEL1L3Q68CR1 1132 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 LBX2Q6XYB7 198 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 PPTC7Q8NI37 304 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 HELQQ8TDG4 1101 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 NDRG1Q92597 394 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 APOPT1Q96IL0 206 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 TTYH3Q9C0H2 523 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 LRRC19Q9H756 370 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 UTP6Q9NYH9 597 aaKnown RBP13.34□□□□□ -0.27
VSTM4-202ENST00000332853 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
VSTM4-202ENST00000332853 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.27
VSTM4-202ENST00000332853 ZNF862O60290 1169 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 MMP3P08254 477 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 JAM2P57087 298 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 FLOT2Q14254 428 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 PDPK2PQ6A1A2 396 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 FOXR2Q6PJQ5 311 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 C12orf56Q8IXR9 622 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 OR52K1Q8NGK4 314 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 DNAJC9Q8WXX5 260 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 ART4Q93070 314 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 WNT8BQ93098 351 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 TBC1D13Q9NVG8 400 aa13.33□□□□□ -0.27
VSTM4-202ENST00000332853 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.27
VSTM4-202ENST00000332853 A8MX80 341 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 AVILO75366 819 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 CYGBQ8WWM9 190 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 RXFP1Q9HBX9 757 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 SLC45A4Q5BKX6 768 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF75CPQ92670 426 aaPredicted RBP13.33□□□□□ -0.28
VSTM4-202ENST00000332853 DRG1Q9Y295 367 aaKnown RBP13.33□□□□□ -0.28
VSTM4-202ENST00000332853 MGEA5O60502 916 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 INPP1P49441 399 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 EML3Q32P44 896 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 RNF157Q96PX1 679 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 PTPRHQ9HD43 1115 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 MYO1GB0I1T2 1018 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
VSTM4-202ENST00000332853 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
VSTM4-202ENST00000332853 GRTP1Q5TC63 336 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 NRDE2Q9H7Z3 1164 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 ARMCX1Q9P291 453 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 LRP6O75581 1613 aa13.33□□□□□ -0.28
VSTM4-202ENST00000332853 TMEM154Q6P9G4 183 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SERPINB11Q96P15 392 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 CATSPER2Q96P56 530 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ADNPQ9H2P0 1102 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ARHGAP26Q9UNA1 814 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ARHGAP10A1A4S6 786 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 TPST1O60507 370 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 VPS26AO75436 327 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 MZF1P28698 734 aaPredicted RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 PLD1Q13393 1074 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SNX5Q9Y5X3 404 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 CRTAMO95727 393 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SPANXN3Q5MJ09 141 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 TMC7Q7Z402 723 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 TMEM86AQ8N2M4 240 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 PGM2Q96G03 612 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 PGBD3Q8N328 593 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ANKRD52Q8NB46 1076 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 C2CD2Q9Y426 696 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 IPPQ9Y573 584 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
VSTM4-202ENST00000332853 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 TPP1O14773 563 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 KCNA3P22001 575 aa13.32□□□□□ -0.28
VSTM4-202ENST00000332853 ARL2P36404 184 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms