RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ARHGEF2Q92974 986 aaKnown RBP17.5■□□□□ 0.39
DDX41-201ENST00000330503 VWCEQ96DN2 955 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 TMEM175Q9BSA9 504 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 RABEP2Q9H5N1 569 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 ARHGEF38Q9NXL2 777 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 RABGEF1Q9UJ41 708 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 SCML2Q9UQR0 700 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 CDH16O75309 829 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 VNN2O95498 520 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 GLUD2P49448 558 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 TPI1P60174 286 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 PDK1Q15118 436 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 ZSCAN26Q16670 478 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 ANKRD20A2Q5SQ80 823 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 ANKRD20A1Q5TYW2 823 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 ANKRD20A3Q5VUR7 823 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX41-201ENST00000330503 NUP93Q8N1F7 819 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 OSBPL2Q9H1P3 480 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 IL37Q9NZH6 218 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 SFMBT1Q9UHJ3 866 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 TEX264Q9Y6I9 313 aa17.5■□□□□ 0.39
DDX41-201ENST00000330503 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
DDX41-201ENST00000330503 TANC1Q9C0D5 1861 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 EXOC1LA0A1B0GW35 172 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 IRAK2O43187 625 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 ELK3P41970 407 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 USP46P62068 366 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 RTP2Q5QGT7 225 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 ARTNQ5T4W7 220 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 ZNF280DQ6N043 979 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 C3orf62Q6ZUJ4 267 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 TDRPQ86YL5 185 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 ATP11CQ8NB49 1132 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 MCUQ8NE86 351 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 RNF34Q969K3 372 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 TOX2Q96NM4 488 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 BEGAINQ9BUH8 593 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 EPN3Q9H201 632 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 TBK1Q9UHD2 729 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 NUDT5Q9UKK9 219 aa17.49■□□□□ 0.39
DDX41-201ENST00000330503 A0A0A0MRY4 1105 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 TRIM66O15016 1216 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 LRIG2O94898 1065 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 APRTP07741 180 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 CHN1P15882 459 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 ARPP19P56211 112 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 AP1B1Q10567 949 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 PPP1R21Q6ZMI0 780 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 CENPTQ96BT3 561 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SPATA13Q96N96 652 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SELENOSQ9BQE4 189 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 MRPL9Q9BYD2 267 aaKnown RBP17.48■□□□□ 0.39
DDX41-201ENST00000330503 CRISPLD1Q9H336 500 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SMOC2Q9H3U7 446 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 CHMP2BQ9UQN3 213 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 POC1B-GALNT4F8VUJ3 575 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 MSI1O43347 362 aaKnown RBP17.48■□□□□ 0.39
DDX41-201ENST00000330503 SOAT2O75908 522 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 TSHRP16473 764 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 ZNF135P52742 658 aaPredicted RBP17.48■□□□□ 0.39
DDX41-201ENST00000330503 SEC24CP53992 1094 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SEMA5AQ13591 1074 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 ARHGEF18Q6ZSZ5 1173 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 MON1AQ86VX9 555 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 PALM2Q8IXS6 379 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 VPS52Q8N1B4 723 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 NPWQ8N729 165 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 CCNYQ8ND76 341 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 GPR152Q8TDT2 470 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SLC27A5Q9Y2P5 690 aa17.48■□□□□ 0.39
DDX41-201ENST00000330503 SRRM3A6NNA2 597 aaPredicted RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 PARNO95453 639 aaKnown RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 TPSB2P20231 275 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 TPSAB1Q15661 275 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 ZNF534Q76KX8 674 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 TAOK1Q7L7X3 1001 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 RIBC1Q8N443 379 aaPredicted RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 BCAS4Q8TDM0 211 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 FBF1Q8TES7 1133 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 DIS3LQ8TF46 1054 aaKnown RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 EPAS1Q99814 870 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 FRMD8Q9BZ67 464 aaPredicted RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 NEU3Q9UQ49 428 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 RAD54BQ9Y620 910 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 RNF103O00237 685 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 PPP1R12AO14974 1030 aaPredicted RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 UPP2O95045 317 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 EFEMP2O95967 443 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 ATP5DP30049 168 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 HNRNPH2P55795 449 aaKnown RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 GPR17Q13304 367 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 BRMS1LQ5PSV4 323 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 DENND5BQ6ZUT9 1274 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 PDZD4Q76G19 769 aaPredicted RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms