RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 OLIG2Q13516 323 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 N4BP2L1Q5TBK1 243 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CYB5D1Q6P9G0 228 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 RGS9BPQ6ZS82 235 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CPT1BQ92523 772 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 PRCCQ92733 491 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 EGFL8Q99944 293 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 DNAJC16Q9Y2G8 782 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 TNRC6CQ9HCJ0 1690 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CCL22O00626 93 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 OR1E1P30953 314 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 SERPINB4P48594 390 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 SKOR1P84550 965 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 MPP3Q13368 585 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ITGA7Q13683 1181 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CSHL1Q14406 222 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 TARBP2Q15633 366 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 FAM35AQ86V20 835 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CFAP52Q8N1V2 620 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 P2RY11Q96G91 374 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 PCED1BQ96HM7 432 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ZWINTO95229 277 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 F9P00740 461 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 SERPINB3P29508 390 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 RAP1GAP2Q684P5 730 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CACUL1Q86Y37 369 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ZC3H3Q8IXZ2 948 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 UNC5BQ8IZJ1 945 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 PIP4K2CQ8TBX8 421 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 WWP1Q9H0M0 922 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 PFDN6O15212 129 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 DNAJC6O75061 913 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 RPL17P18621 184 aaKnown RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 NFKB1P19838 968 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 DBN1Q16643 649 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 SLC45A4Q5BKX6 768 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 LRRC38Q5VT99 294 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 LATS2Q9NRM7 1088 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-201ENST00000321105 MOSPD1Q9UJG1 213 aa11.3□□□□□ -0.6
TOP3A-201ENST00000321105 H0Y626 953 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 CHRM3P20309 590 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MATKP42679 507 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PITX1P78337 314 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ZDHHC14Q8IZN3 488 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 CD99L2Q8TCZ2 262 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MAGEB18Q96M61 343 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 RUVBL2Q9Y230 463 aaKnown RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ADGRA2Q96PE1 1338 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 SMIM35A0A1B0GVV1 85 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MFSD11O43934 449 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 AOC2O75106 756 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 SUPT7LO94864 414 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TMEM63AO94886 807 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ITGB6P18564 788 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TSPAN8P19075 237 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TNFRSF8P28908 595 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 SERPINB5P36952 375 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 RECQLP46063 649 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 SGO1Q5FBB7 561 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ZRANB3Q5FWF4 1079 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 FRA10AC1Q70Z53 315 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ANKRD23Q86SG2 305 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
TOP3A-201ENST00000321105 DEFB118Q96PH6 123 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 CAB39LQ9H9S4 337 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 PLK2Q9NYY3 685 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 MFHAS1Q9Y4C4 1052 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 C10orf71Q711Q0 1435 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ITGAVP06756 1048 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TBX4P57082 545 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 CTBP1Q13363 440 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 CERCAMQ5T4B2 595 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TMTC4Q5T4D3 741 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ZNF470Q6ECI4 717 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 OMDQ99983 421 aa11.29□□□□□ -0.6
TOP3A-201ENST00000321105 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms