RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CORINQ9Y5Q5 1042 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 LCTP09848 1927 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 A0A1W2PRG0 241 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 POTEMA6NI47 508 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 TRIM77I1YAP6 450 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ZW10O43264 779 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 MSI1O43347 362 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 MAP3K6O95382 1288 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SLC26A3P40879 764 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PTPN9P43378 593 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 STX1BP61266 288 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PRKCQQ04759 706 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 FCHO2Q0JRZ9 810 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CCNG2Q16589 344 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PPM1LQ5SGD2 360 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SHEQ5VZ18 495 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 KIAA1841Q6NSI8 718 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 METTL2BQ6P1Q9 378 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 OTOP1Q7RTM1 612 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ADAMTSL2Q86TH1 951 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CCDC25Q86WR0 208 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CPNE9Q8IYJ1 553 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 UBR7Q8N806 425 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 RBM15BQ8NDT2 890 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 SLC26A7Q8TE54 656 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 BCL7CQ8WUZ0 217 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 PMM1Q92871 262 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 DYNLL2Q96FJ2 89 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 WDR90Q96KV7 1748 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 INO80BQ9C086 356 aaPredicted RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 TRIT1Q9H3H1 467 aaKnown RBP6.84□□□□□ -1.31
ZNF540-201ENST00000316433 GGA1Q9UJY5 639 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 ARHGAP26Q9UNA1 814 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 NR2E1Q9Y466 385 aa6.84□□□□□ -1.31
ZNF540-201ENST00000316433 CLUHO75153 1309 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 E7ESA3 106 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 H0YC42 278 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 hCG_2039718K7EN88 272 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 NUAK1O60285 661 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 POLR2MP0CAP2 368 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FDX1P10109 184 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PRELPP51888 382 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TPD52P55327 224 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF200P98182 395 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CDK16Q00536 496 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 EFHC1Q5JVL4 640 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 STXBP5Q5T5C0 1151 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 IGFN1Q86VF2 1251 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CHSY1Q86X52 802 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ZCCHC9Q8N567 271 aaKnown RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PSD4Q8NDX1 1056 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 GSTCDQ8NEC7 633 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TTLQ8NG68 377 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 RFWD2Q8NHY2 731 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ALKBH8Q96BT7 664 aaKnown RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CDK5RAP1Q96SZ6 601 aaKnown RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ZNF717Q9BY31 904 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FRMD8Q9BZ67 464 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FBXO6Q9NRD1 293 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 GDAP2Q9NXN4 497 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SNTG2Q9NY99 539 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PPP1R1BQ9UD71 204 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SERPINA10Q9UK55 444 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SCN9AQ15858 1988 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 A0A0G2JND7 137 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 IQANK1A0A1B0GTG1 560 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 hCG_1642624A0A1W2PR95 340 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FAM170AA1A519 330 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 H0YCG3 227 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 XPO1O14980 1071 aaKnown RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CYP26A1O43174 497 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 GRIN3BO60391 1043 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CDH16O75309 829 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 RNASEH2AO75792 299 aaKnown RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TTC4O95801 387 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 PAHP00439 452 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 C8BP07358 591 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CD9P21926 228 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CDH5P33151 784 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 RFC1P35251 1148 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SLC26A2P50443 739 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 EVX2Q03828 476 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CALCOCO2Q13137 446 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 CLVS2Q5SYC1 327 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 C1orf220Q5T0J3 134 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 ATAD3BQ5T9A4 648 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FAM205BPQ63HN1 556 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SH3BP5LQ7L8J4 393 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 MTMR14Q8NCE2 650 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 FBXO27Q8NI29 283 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 TGFBRAP1Q8WUH2 860 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 SLC7A3Q8WY07 619 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 MAML1Q92585 1016 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 HSPH1Q92598 858 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 JADE3Q92613 823 aa6.83□□□□□ -1.32
ZNF540-201ENST00000316433 EEF2KMTQ96G04 330 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms