RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CGRRF1Q99675 332 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 LRRC42Q9Y546 428 aa15.02□□□□□ -0.01
PTPN9-201ENST00000306726 DNAH12Q6ZR08 3092 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 PRPF4O43172 522 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 SLC26A4O43511 780 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 ACO1P21399 889 aaKnown RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 NDST1P52848 882 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CDC16Q13042 620 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 KCTD2Q14681 263 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 ARHGEF6Q15052 776 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 GOLGA7BQ2TAP0 167 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 HSP90AA5PQ58FG0 334 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 SPDYAQ5MJ70 313 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CTU1Q7Z7A3 348 aaKnown RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 OCEL1Q9H607 264 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 METTL18O95568 372 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 GARTP22102 1010 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CCDC142Q17RM4 750 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 MAP7D1Q3KQU3 841 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 SFT2D3Q587I9 215 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 PDPK2PQ6A1A2 396 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 RPS27LQ71UM5 84 aaKnown RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CDKL2Q92772 493 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 NDNQ99608 321 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 TSPAN16Q9UKR8 245 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 FAF1Q9UNN5 650 aaPredicted RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 HEMK1Q9Y5R4 338 aaPredicted RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 PAPSS1O43252 624 aaPredicted RBP15.01□□□□□ -0.01
PTPN9-201ENST00000306726 CA12O43570 354 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 MTA2O94776 668 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 ALADP13716 330 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 PMLP29590 882 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 TFDP2Q14188 446 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 DCAF6Q58WW2 860 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 UNC5AQ6ZN44 842 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 WDTC1Q8N5D0 677 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 VCX3AQ9NNX9 186 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 AURKCQ9UQB9 309 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 LZTS1Q9Y250 596 aa15.01□□□□□ -0.01
PTPN9-201ENST00000306726 GOLGA8CPA6NN73 597 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 LDHAP00338 332 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 DLDP09622 509 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 GPD1P21695 349 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 OASLQ15646 514 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 CWF19L1Q69YN2 538 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 ADGRD1Q6QNK2 874 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 MED10Q9BTT4 135 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 RBPJLQ9UBG7 517 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 CACNG4Q9UBN1 327 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 DTNAQ9Y4J8 743 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 PSAT1Q9Y617 370 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ADGRA2Q96PE1 1338 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 HNRNPCP07910 306 aaKnown RBP eCLIP15□□□□□ -0.018e-8■□□□□ 9.6
PTPN9-201ENST00000306726 PTPN11Q06124 597 aaPredicted RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 ACVR2BQ13705 512 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 FBXO48Q5FWF7 155 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 SNX32Q86XE0 403 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ZNF677Q86XU0 584 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 HPDLQ96IR7 371 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 WDR83Q9BRX9 315 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 UBE2OQ9C0C9 1292 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 TASP1Q9H6P5 420 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ATP6AP2A0A1C7CYW4 349 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 A8MXQ7 604 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 TM9SF1O15321 606 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ATP6AP2O75787 350 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 SRGAP2BP0DMP2 458 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 CD1EP15812 388 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ACAT1P24752 427 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 YWHAZP63104 245 aaKnown RBP15□□□□□ -0.01
PTPN9-201ENST00000306726 ITKQ08881 620 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 PRPSAP1Q14558 356 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 VSIG10LQ86VR7 867 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 CDHR1Q96JP9 859 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 SOX13Q9UN79 622 aa15□□□□□ -0.01
PTPN9-201ENST00000306726 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 CNMDO75829 334 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 SKIV2L2P42285 1042 aaKnown RBP14.99□□□□□ -0.01
PTPN9-201ENST00000306726 RAB27AP51159 221 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 FLOT2Q14254 428 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 GK3PQ14409 553 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 C6orf52Q5T4I8 152 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 KRT80Q6KB66 452 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 EFCAB12Q6NXP0 572 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 PEBP4Q96S96 227 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 EPAS1Q99814 870 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 SAGE1Q9NXZ1 904 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 MED7O43513 233 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 ROR2Q01974 943 aaKnown RBP14.99□□□□□ -0.01
PTPN9-201ENST00000306726 IRF5Q13568 498 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 RWDD4Q6NW29 188 aaKnown RBP14.99□□□□□ -0.01
PTPN9-201ENST00000306726 FAM183BPQ6ZVS7 135 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 PHF13Q86YI8 300 aaPredicted RBP14.99□□□□□ -0.01
PTPN9-201ENST00000306726 FBXO16Q8IX29 292 aaPredicted RBP14.99□□□□□ -0.01
PTPN9-201ENST00000306726 TP53INP2Q8IXH6 220 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 OR6Y1Q8NGX8 325 aa14.99□□□□□ -0.01
PTPN9-201ENST00000306726 CELF6Q96J87 481 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms