RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MRPS23Q9Y3D9 190 aaKnown RBP8.55□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM86B1E9PN63 330 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 WEE2P0C1S8 567 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM86B2P0C5J1 330 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CCDC130P13994 396 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PPP2R1BP30154 601 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CLK1P49759 484 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SESN2P58004 480 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ITGA9Q13797 1035 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NT5DC1Q5TFE4 455 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CD99L2Q8TCZ2 262 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 UBE2OQ9C0C9 1292 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TMEM117Q9H0C3 514 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 EXO5Q9H790 373 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 KLHL28Q9NXS3 571 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 AHSPQ9NZD4 102 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 DCDC2Q9UHG0 476 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SMG5Q9UPR3 1016 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RAD54BQ9Y620 910 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RHOBTB1O94844 696 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RHOCP08134 193 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SERPINF2P08697 491 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RFX3P48380 749 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CCR3P51677 355 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CDK16Q00536 496 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 GNA13Q14344 377 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PKN1Q16512 942 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ALG11Q2TAA5 492 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 MCOLN3Q8TDD5 553 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ATP6V1HQ9UI12 483 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 A0A088AWK7 358 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PHF2O75151 1096 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 POLR2EP19388 210 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ALDH18A1P54886 795 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RPS7P62081 194 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 MMRN1Q13201 1228 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PCSK7Q16549 785 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 HECTD3Q5T447 861 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC35G2Q8TBE7 412 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 HHIPL1Q96JK4 782 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 OSBPL8Q9BZF1 889 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PRKD2Q9BZL6 878 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 EXOSC4Q9NPD3 245 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NPHP3-ACAD11A0A0J9YXS1 232 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 KANSL1LA0AUZ9 987 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SAC3D1A6NKF1 404 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 HACD1B0YJ81 288 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 GLUD1P00367 558 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RALGDSQ12967 914 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 LRRC8DQ7L1W4 858 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 GLMNQ92990 594 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 S100A13Q99584 98 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 DCTN4Q9UJW0 460 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 KPNA5O15131 536 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 IGSF6O95976 241 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CNPP09543 421 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PTPN3P26045 913 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 GTF2BQ00403 316 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TUSC3Q13454 348 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NID2Q14112 1375 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 IZUMO3Q5VZ72 239 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP4Z2PQ8N1L4 340 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 AGAP3Q96P47 875 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TTPALQ9BTX7 342 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NIFKQ9BYG3 293 aaKnown RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RGS18Q9NS28 235 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM47DPA6NHR8 397 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 AKAP10O43572 662 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 ENO2P09104 434 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 CCNG2Q16589 344 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 USP6NLQ92738 828 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SHDQ96IW2 340 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 TASP1Q9H6P5 420 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SNTG2Q9NY99 539 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 VPS28Q9UK41 221 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 FBXO10Q9UK96 956 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 USP18Q9UMW8 372 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 RAMP2O60895 175 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 PSMD10O75832 226 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NFICP08651 508 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 USP17L7P0C7H9 530 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 STX5Q13190 355 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 HYIQ5T013 277 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM45BPQ6NSW5 357 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 STK40Q8N2I9 435 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 NLGN2Q8NFZ4 835 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 C20orf96Q9NUD7 363 aaPredicted RBP8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 SEPT3Q9UH03 358 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms