RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 DBTP11182 482 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ACADSBP45954 432 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 FASTKQ14296 549 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF621Q6ZSS3 439 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 FNIP1Q8TF40 1166 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 FAM20AQ96MK3 541 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 COG5Q9UP83 839 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 KMOO15229 486 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 RGS14O43566 566 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ADGRF4Q8IZF3 695 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 PHF21BQ96EK2 531 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 REEP1Q9H902 201 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 NPR2P20594 1047 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CENPCQ03188 943 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ERO1BQ86YB8 467 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ZMYM5Q9UJ78 669 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 A0A087WXM4 84 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 PRLP01236 227 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 SLC26A3P40879 764 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 COPZ1P61923 177 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 PSMD5Q16401 504 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TMEM168Q9H0V1 697 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CCDC177Q9NQR7 707 aaPredicted RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 LRCH1Q9Y2L9 728 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 HSD3B1P14060 373 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 NMT1P30419 496 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 GPAT2Q6NUI2 795 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 C11orf63Q6NUN7 778 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 NCKIPSDQ9NZQ3 722 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PCDH8O95206 1070 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 GPR15P49685 360 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 CES2O00748 559 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 CD3EAPO15446 510 aaKnown RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 LARGE1O95461 756 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 SLC1A6P48664 564 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 LRRC4BQ9NT99 713 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 KCNQ3O43525 872 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RPS6KA5O75582 802 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 MAGEA12P43365 314 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 BPIFB6Q8NFQ5 453 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RPH3AQ9Y2J0 694 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 OR1G1P47890 313 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PPP2R2BQ00005 443 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RPS6KA6Q9UK32 745 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 TIPRLO75663 272 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 LIFRP42702 1097 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PDIA6Q15084 440 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 SV2CQ496J9 727 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 CCNI2Q6ZMN8 369 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 SH2D3AQ9BRG2 576 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 SAE1Q9UBE0 346 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 FOSL1P15407 271 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PCSK1P29120 753 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 GSTT1P30711 240 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RPL4P36578 427 aaKnown RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 HIRAP54198 1017 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 TCF7L2Q9NQB0 619 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 SLC38A7Q9NVC3 462 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 EPHB2P29323 1055 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 NOL9Q5SY16 702 aaKnown RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 C8orf59Q8N0T1 100 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 VPS35Q96QK1 796 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 DHRS7Q9Y394 339 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 EPN2O95208 641 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RBP3P10745 1247 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 IL18R1Q13478 541 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 KCNA10Q16322 511 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 RFX4Q33E94 735 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 ITCHQ96J02 903 aa13.68□□□□□ -0.22
TRIM56-201ENST00000306085 TIMM8BQ9Y5J9 83 aaPredicted RBP13.68□□□□□ -0.22
TRIM56-201ENST00000306085 VBP1P61758 197 aa13.67□□□□□ -0.22
TRIM56-201ENST00000306085 INO80DQ53TQ3 878 aaPredicted RBP13.67□□□□□ -0.22
TRIM56-201ENST00000306085 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
TRIM56-201ENST00000306085 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
TRIM56-201ENST00000306085 ARMCX1Q9P291 453 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms