RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RAET1GQ6H3X3 334 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 ZC3H7AQ8IWR0 971 aaKnown RBP12.71□□□□□ -0.37
SLX4-201ENST00000294008 C5orf34Q96MH7 638 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 CEP41Q9BYV8 373 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 PCF11O94913 1555 aaKnown RBP12.71□□□□□ -0.37
SLX4-201ENST00000294008 CCDC163A0A0D9SF12 145 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 SLC1A1P43005 524 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.37
SLX4-201ENST00000294008 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 SSH2Q76I76 1423 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.37
SLX4-201ENST00000294008 TRBV23OR9-2A0A075B6M9 112 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 H7C0S8 307 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 CENPCQ03188 943 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 PYHIN1Q6K0P9 492 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 ARMC8Q8IUR7 673 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 ZSWIM2Q8NEG5 633 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
SLX4-201ENST00000294008 ZNF185O15231 689 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 TMCC2O75069 709 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.38
SLX4-201ENST00000294008 IFNGR2P38484 337 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 HSPA13P48723 471 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 RGS1Q08116 209 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.38
SLX4-201ENST00000294008 MIEF2Q96C03 454 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.38
SLX4-201ENST00000294008 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 GGA2Q9UJY4 613 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 CFAP65Q6ZU64 1925 aaKnown RBP12.71□□□□□ -0.38
SLX4-201ENST00000294008 A0A1W2PQ27 194 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 A0A1W2PQ64 194 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 A0A1W2PQD8 194 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 OR5F1O95221 314 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.38
SLX4-201ENST00000294008 LINC00301Q8NCQ3 95 aa12.71□□□□□ -0.38
SLX4-201ENST00000294008 TRIM49D1C9J1S8 452 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 PTGES3LE9PB15 166 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 OR56A5P0C7T3 313 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ZNF37AP17032 561 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 CXCR2P25025 360 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 GMPSP49915 693 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 GTF2A2P52657 109 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 RAD23AP54725 363 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 CYP4F2P78329 520 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 CYP4F3Q08477 520 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ZCCHC2Q9C0B9 1178 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 ABCG8Q9H221 673 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 COMMD8Q9NX08 183 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FAM153AQ9UHL3 310 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 CHL1O00533 1208 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 CD3EAPO15446 510 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 HLA-DRAP01903 254 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 PROM2Q8N271 834 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 OR10H5Q8NGA6 315 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FAM81AQ8TBF8 368 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 A0A087WZ62 844 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 A0A0B4J269 797 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FAM187AA6NFU0 413 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AVILO75366 819 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 RGS20O76081 388 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 XPR1Q9UBH6 696 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 COG5Q9UP83 839 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 IL1BP01584 269 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 HPCAL1P37235 193 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 HSDL1Q3SXM5 330 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ZNF227Q86WZ6 799 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AP4E1Q9UPM8 1137 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AAR2Q9Y312 384 aaKnown RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 OR1E1P30953 314 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 HLFQ16534 295 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ZC2HC1CQ53FD0 456 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 GLT6D1Q7Z4J2 308 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 AMIGO1Q86WK6 493 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 ATL1Q8WXF7 558 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 FCHO1O14526 889 aa12.7□□□□□ -0.38
SLX4-201ENST00000294008 PLGP00747 810 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 CYP2A6P11509 494 aaPredicted RBP12.7□□□□□ -0.38
SLX4-201ENST00000294008 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms