RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 TBC1D10AQ9BXI6 508 aa18.92■□□□□ 0.62
SHKBP1-201ENST00000291842 PRDM12Q9H4Q4 367 aa18.92■□□□□ 0.62
SHKBP1-201ENST00000291842 CRTAC1Q9NQ79 661 aa18.92■□□□□ 0.62
SHKBP1-201ENST00000291842 ANLNQ9NQW6 1124 aa18.92■□□□□ 0.62
SHKBP1-201ENST00000291842 KCNK1O00180 336 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 DLDP09622 509 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 CACNA2D1P54289 1103 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 CTC1Q2NKJ3 1217 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 CES3Q6UWW8 571 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 PPP1R10Q96QC0 940 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 ULBP1Q9BZM6 244 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 TMEM30AQ9NV96 361 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 SCN4AP35499 1836 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 YJEFN3A6XGL0 299 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 E7ENQ6 273 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 CAPN9O14815 690 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 FYNP06241 537 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 CTSHP09668 335 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 TMPRSS15P98073 1019 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 ZBTB16Q05516 673 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 SENP8Q96LD8 212 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 GAD1Q99259 594 aa18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-201ENST00000291842 MYBPHLA2RUH7 354 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 H3BRJ5 948 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 FAM200BP0CF97 657 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 KITP10721 976 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 MYL2P10916 166 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 SARNPP82979 210 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 CHI3L2Q15782 390 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 FSCN1Q16658 493 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 TTC7BQ86TV6 843 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 ZNF398Q8TD17 642 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 WNT8BQ93098 351 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 NT5C3BQ969T7 300 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 RHOBTB2Q9BYZ6 727 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 DNAI2Q9GZS0 605 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 ARL8BQ9NVJ2 186 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 MOCS1Q9NZB8 636 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 HACD1B0YJ81 288 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 I6L893 689 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 TOMM70O94826 608 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 ANP32DO95626 131 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 RPSAP08865 295 aaKnown RBP18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 USP17L7P0C7H9 530 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 LRPAP1P30533 357 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 CLCNKBP51801 687 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 BST1Q10588 318 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 RFX8Q6ZV50 586 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 ZNF567Q8N184 647 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 GSTCDQ8NEC7 633 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 PGBD4Q96DM1 585 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 AGAP3Q96P47 875 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 MIOSQ9NXC5 875 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 MARCOQ9UEW3 520 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 STAP1Q9ULZ2 295 aa18.9■□□□□ 0.62
SHKBP1-201ENST00000291842 SDR42E2A6NKP2 422 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 AP1G2O75843 785 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 GSTA2P09210 222 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 FDFT1P37268 417 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 WASHC5Q12768 1159 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 ZCCHC23Q6ZST2 131 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 BZW1Q7L1Q6 419 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 NUDCD3Q8IVD9 361 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 C3orf58Q8NDZ4 430 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PAAF1Q9BRP4 392 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 MAGED2Q9UNF1 606 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PSAT1Q9Y617 370 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 GABRDO14764 452 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 USP12O75317 370 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 HAUS5O94927 633 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 F7P08709 466 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 C6orf222P0C671 652 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 CCNFP41002 786 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PURAQ00577 322 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PARP6Q2NL67 630 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 C16orf46Q6P387 395 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PID1Q7Z2X4 250 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 CCDC91Q7Z6B0 441 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 FAM13CQ8NE31 585 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 ARNTL2Q8WYA1 636 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 EDEM1Q92611 657 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 INPP5DQ92835 1189 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 E2F7Q96AV8 911 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 PCED1BQ96HM7 432 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 SMOQ99835 787 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 C20orf27Q9GZN8 174 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 SYBUQ9NX95 663 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 RCOR3Q9P2K3 495 aaPredicted RBP18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 SNX10Q9Y5X0 201 aa18.89■□□□□ 0.61
SHKBP1-201ENST00000291842 CASTOR2A6NHX0 329 aa18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 I3L4J1 428 aa18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 STK10O94804 968 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 NCAM1P13591 858 aa18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 CDK16Q00536 496 aa18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 LRRC8BQ6P9F7 803 aa18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 ALYREFQ86V81 257 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-201ENST00000291842 KCTD13Q8WZ19 329 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms