RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RSPH1Q8WYR4 309 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SMAD5Q99717 465 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 TXNRD2Q9NNW7 524 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 IRAK4Q9NWZ3 460 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 PRKAG2Q9UGJ0 569 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 FAM50BQ9Y247 325 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLIT2O94813 1529 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ENTPD5O75356 428 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ESRRBO95718 433 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 DRD4P21917 467 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PAX7P23759 505 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 RGS2P41220 211 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CTBP1Q13363 440 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MAP7Q14244 749 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 KPNB1Q14974 876 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CCL14Q16627 93 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ANKRD20A4Q4UJ75 823 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PPM1JQ5JR12 505 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ANKRD20A2Q5SQ80 823 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SWT1Q5T5J6 900 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ANKRD20A1Q5TYW2 823 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 DEFB107AQ8IZN7 70 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CLPTM1LQ96KA5 538 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 RXFP1Q9HBX9 757 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLC38A7Q9NVC3 462 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 NOCTQ9UK39 431 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 MTO1Q9Y2Z2 717 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 PKP3Q9Y446 797 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MFHAS1Q9Y4C4 1052 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 GAS2O43903 313 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ASS1P00966 412 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 MCF2P10911 925 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PBX3P40426 434 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SERPINB4P48594 390 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PLOD1Q02809 727 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 USP4Q13107 963 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLC1A5Q15758 541 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ASTE1Q2TB18 679 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ZNF618Q5T7W0 954 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MON1BQ7L1V2 547 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CIR1Q86X95 450 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 UNC5BQ8IZJ1 945 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 B3GALNT2Q8NCR0 500 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 DNAJC9Q8WXX5 260 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CATSPERBQ9H7T0 1116 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PLA2G4CQ9UP65 541 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MARF1Q9Y4F3 1742 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CRYBG1Q9Y4K1 1723 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SLX4Q8IY92 1834 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 TOP3BO95985 862 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 RALBP11234 206 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 CCL23P55773 120 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 MPP3Q13368 585 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 PDK2Q15119 407 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 STILQ15468 1287 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ZNF470Q6ECI4 717 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CYP2R1Q6VVX0 501 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 KCNMB4Q86W47 210 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CCDC185Q8N715 623 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 OR6K2Q8NGY2 324 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 GLT1D1Q96MS3 346 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 CYP2S1Q96SQ9 504 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 SEMA6AQ9H2E6 1030 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 KDM4CQ9H3R0 1056 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 ABHD16BQ9H3Z7 469 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 NRDE2Q9H7Z3 1164 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 WARS2Q9UGM6 360 aaKnown RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 ZNF214Q9UL59 606 aaPredicted RBP4.91□□□□□ -1.62
UBR1-201ENST00000290650 AK5Q9Y6K8 562 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 RPTORQ8N122 1335 aa4.91□□□□□ -1.62
UBR1-201ENST00000290650 BTBD19C9JJ37 291 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 NR5A2O00482 541 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 FCHO1O14526 889 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 LCA5LO95447 670 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 RECQLP46063 649 aaPredicted RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 ALDH7A1P49419 539 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 MAPK10P53779 464 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 SLC25A3Q00325 362 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ITIH4Q14624 930 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 PDPK2PQ6A1A2 396 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 SLC9A9Q8IVB4 645 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ST13P4Q8IZP2 240 aaPredicted RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 EME1Q96AY2 570 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 KCNK16Q96T55 309 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 NUP205Q92621 2012 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 TBKBP1A7MCY6 615 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ANGPT2O15123 496 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 AXIN1O15169 862 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 DHX15O43143 795 aaKnown RBP4.9□□□□□ -1.62
UBR1-201ENST00000290650 PEX1O43933 1283 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 LRCH4O75427 683 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 TRIM16O95361 564 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 ASMTLO95671 621 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 OR1E1P30953 314 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 PGGT1BP53609 377 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 COPAP53621 1224 aa4.9□□□□□ -1.62
UBR1-201ENST00000290650 SH3BGRP55822 239 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms