RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EURLQ9NYK6 297 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 SFMBT1Q9UHJ3 866 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 PTCH2Q9Y6C5 1203 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 CASP8AP2Q9UKL3 1982 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 TET1Q8NFU7 2136 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 NT5C1B-RDH14C9J2C7 533 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ATP6V1G2O95670 118 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ABHD2P08910 425 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 NUMBP49757 651 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 VEGFBP49765 207 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 SPARCL1Q14515 664 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 FAM26DQ5JW98 314 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 FAM171BQ6P995 826 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 RFX8Q6ZV50 586 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ARCQ7LC44 396 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 CAND1Q86VP6 1230 aaKnown RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 TTC9BQ8N6N2 239 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ZNF296Q8WUU4 475 aaPredicted RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 CHMP6Q96FZ7 201 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ACBD6Q9BR61 282 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 CNGB3Q9NQW8 809 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 RGS18Q9NS28 235 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 TBC1D13Q9NVG8 400 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ETAA1Q9NY74 926 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 ZMYND8Q9ULU4 1186 aaPredicted RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
VMP1-201ENST00000262291 MAD1L1Q9Y6D9 718 aa14.01□□□□□ -0.17
VMP1-201ENST00000262291 TCP11X1B4DZS4 312 aa14□□□□□ -0.17
VMP1-201ENST00000262291 H3BRJ5 948 aa14□□□□□ -0.17
VMP1-201ENST00000262291 TCEA3O75764 348 aa14□□□□□ -0.17
VMP1-201ENST00000262291 SRGAP2BP0DMP2 458 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 YWHAHQ04917 246 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 TCTN1Q2MV58 587 aa14□□□□□ -0.17
VMP1-201ENST00000262291 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
VMP1-201ENST00000262291 RAB41Q5JT25 222 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ARHGEF18Q6ZSZ5 1173 aa14□□□□□ -0.17
VMP1-201ENST00000262291 SLC24A5Q71RS6 500 aa14□□□□□ -0.17
VMP1-201ENST00000262291 TFB1MQ8WVM0 346 aaKnown RBP14□□□□□ -0.17
VMP1-201ENST00000262291 CELF6Q96J87 481 aaKnown RBP14□□□□□ -0.17
VMP1-201ENST00000262291 SEC16BQ96JE7 1060 aa14□□□□□ -0.17
VMP1-201ENST00000262291 QKIQ96PU8 341 aaKnown RBP eCLIP14□□□□□ -0.178e-15■■■■■ 49.6
VMP1-201ENST00000262291 PAFAH2Q99487 392 aa14□□□□□ -0.17
VMP1-201ENST00000262291 KLC2Q9H0B6 622 aa14□□□□□ -0.17
VMP1-201ENST00000262291 TKTL2Q9H0I9 626 aa14□□□□□ -0.17
VMP1-201ENST00000262291 TRABDQ9H4I3 376 aa14□□□□□ -0.17
VMP1-201ENST00000262291 PRDM12Q9H4Q4 367 aa14□□□□□ -0.17
VMP1-201ENST00000262291 IRAK4Q9NWZ3 460 aa14□□□□□ -0.17
VMP1-201ENST00000262291 LGALS13Q9UHV8 139 aa14□□□□□ -0.17
VMP1-201ENST00000262291 M0QZQ0 153 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ERCC2P18074 760 aa14□□□□□ -0.17
VMP1-201ENST00000262291 GRK4P32298 578 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ELF3P78545 371 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 DDR2Q16832 855 aa14□□□□□ -0.17
VMP1-201ENST00000262291 DCLRE1AQ6PJP8 1040 aa14□□□□□ -0.17
VMP1-201ENST00000262291 BZW1Q7L1Q6 419 aaKnown RBP14□□□□□ -0.17
VMP1-201ENST00000262291 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 NPWQ8N729 165 aa14□□□□□ -0.17
VMP1-201ENST00000262291 DBF4BQ8NFT6 615 aa14□□□□□ -0.17
VMP1-201ENST00000262291 HTR3CQ8WXA8 447 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 SH3GL3Q99963 347 aa14□□□□□ -0.17
VMP1-201ENST00000262291 ELAC2Q9BQ52 826 aaKnown RBP14□□□□□ -0.17
VMP1-201ENST00000262291 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
VMP1-201ENST00000262291 RNF103O00237 685 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 NBNO60934 754 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CABYRO75952 493 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 FBXO21O94952 628 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TPI1P60174 286 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TSPY1Q01534 308 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 KBTBD12Q3ZCT8 623 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CEP128Q6ZU80 1094 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TRABD2AQ86V40 505 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 VPS52Q8N1B4 723 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 THEM5Q8N1Q8 247 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 P2RY11Q96G91 374 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 SCLYQ96I15 445 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 COLEC11Q9BWP8 271 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 WDCPQ9H6R7 721 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 SH3BP1Q9Y3L3 701 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TCRBV9S1A1TA0A576 114 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 E7ESA3 106 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 HGSO14964 777 aaPredicted RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 UGT1A9O60656 530 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 DGKIO75912 1065 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 ATP5DP30049 168 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 SLC5A3P53794 718 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CAPRIN2Q6IMN6 1127 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 BNIPLQ7Z465 357 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CTAGE3PQ8IX95 158 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 UNC5BQ8IZJ1 945 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms