RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX1-201ENST00000261889 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 SLC4A11Q8NBS3 891 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 FOXP3Q9BZS1 431 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 ATP9BO43861 1147 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 HOXC6P09630 235 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 ITGAXP20702 1163 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 GALK1P51570 392 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 NOMO1Q15155 1222 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 SLC5A9Q2M3M2 681 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 HSDL1Q3SXM5 330 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 CYP4V2Q6ZWL3 525 aaPredicted RBP13.38□□□□□ -0.27
SNX1-201ENST00000261889 SESTD1Q86VW0 696 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
SNX1-201ENST00000261889 FAM110BQ8TC76 370 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 NSUN6Q8TEA1 469 aaKnown RBP13.38□□□□□ -0.27
SNX1-201ENST00000261889 PPP4R1Q8TF05 950 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 ALKBH8Q96BT7 664 aaKnown RBP13.38□□□□□ -0.27
SNX1-201ENST00000261889 LENG8Q96PV6 779 aaPredicted RBP13.38□□□□□ -0.27
SNX1-201ENST00000261889 PCYT2Q99447 389 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
SNX1-201ENST00000261889 SDR42E2A6NKP2 422 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 TMX2-CTNND1H3BSU7 103 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 ADORA2BP29275 332 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 TYK2P29597 1187 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 IDH3AP50213 366 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 NDST1P52848 882 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PTPN11Q06124 597 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 ZNF534Q76KX8 674 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 NET1Q7Z628 596 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 AMIGO2Q86SJ2 522 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 ZNF512Q96ME7 567 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 CATSPER2Q96P56 530 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 NUF2Q9BZD4 464 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 GLTPD2A6NH11 291 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 CREB3O43889 395 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 FGF3P11487 239 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 VAV1P15498 845 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PDCD2Q16342 344 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 BRSK2Q8IWQ3 736 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 NME8Q8N427 588 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PIWIL2Q8TC59 973 aaKnown RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 NAT14Q8WUY8 206 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 HIC2Q96JB3 615 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 RNF157Q96PX1 679 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 WRNIP1Q96S55 665 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 TRIM8Q9BZR9 551 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 GALNT8Q9NY28 637 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 CACNG4Q9UBN1 327 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 GSRP00390 522 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 XRCC1P18887 633 aaPredicted RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 MPSTP25325 297 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 LAMTOR4Q0VGL1 99 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PITRM1Q5JRX3 1037 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 SNX32Q86XE0 403 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 METTL25Q8N6Q8 603 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 TMIGD2Q96BF3 282 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 RPL10LQ96L21 214 aaKnown RBP13.37□□□□□ -0.27
SNX1-201ENST00000261889 OMDQ99983 421 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
SNX1-201ENST00000261889 WDR46O15213 610 aaKnown RBP13.36□□□□□ -0.27
SNX1-201ENST00000261889 KRT38O76015 456 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 GOT1P17174 413 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 UBA1P22314 1058 aaKnown RBP13.36□□□□□ -0.27
SNX1-201ENST00000261889 SLC18A1P54219 525 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 ZNF398Q8TD17 642 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CDRT15Q96T59 188 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 KLC2Q9H0B6 622 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 SUDS3Q9H7L9 328 aaPredicted RBP13.36□□□□□ -0.27
SNX1-201ENST00000261889 SIRPGQ9P1W8 387 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 PTPRFP10586 1907 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 ADGRA2Q96PE1 1338 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 GPR25O00155 361 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 APOL1O14791 398 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
SNX1-201ENST00000261889 MSCO60682 206 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 TNNC2P02585 160 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 GPD1P21695 349 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CXCR3P49682 368 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CDH15P55291 814 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 COG7P83436 770 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 PCLAFQ15004 111 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms