RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TRPV5Q9NQA5 729 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 PARVAQ9NVD7 372 aa12.04□□□□□ -0.48
PFDN1-201ENST00000261813 DUS2Q9NX74 493 aaKnown RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 HBS1LQ9Y450 684 aaKnown RBP12.04□□□□□ -0.48
PFDN1-201ENST00000261813 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 KRBA1A5PL33 1030 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 OTOL1A6NHN0 477 aaPredicted RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 TRUB2O95900 331 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 TFE3P19532 575 aaPredicted RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 RRM1P23921 792 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 CORO1AP31146 461 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 NOS2P35228 1153 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 MATKP42679 507 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 NOP2P46087 812 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 IFNAR2P48551 515 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 NAP1L1P55209 391 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 SIGLEC14Q08ET2 396 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 EIF4EBP2Q13542 120 aaPredicted RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 TUSC1Q2TAM9 212 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 Q6ZNB5 142 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 BMP8AQ7Z5Y6 402 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 SYCE1Q8N0S2 351 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 EMC1Q8N766 993 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 PLD4Q96BZ4 506 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 ZNF653Q96CK0 615 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 SLC39A13Q96H72 371 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 FCRL2Q96LA5 508 aaPredicted RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 SERPINB11Q96P15 392 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 HEBP1Q9NRV9 189 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 GTSE1Q9NYZ3 720 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 WNT16Q9UBV4 365 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 CA14Q9ULX7 337 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 GUCA1BQ9UMX6 200 aa12.03□□□□□ -0.48
PFDN1-201ENST00000261813 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
PFDN1-201ENST00000261813 TMEM221A6NGB7 291 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 M0R296 226 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 IRAK2O43187 625 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 MTA2O94776 668 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 CYP1A2P05177 515 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 ABCB4P21439 1286 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 ARHGAP25P42331 645 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 SOX9P48436 509 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 TBX4P57082 545 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
PFDN1-201ENST00000261813 PFKPQ01813 784 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 NNTQ13423 1086 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 RUNX3Q13761 415 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 SLC44A4Q53GD3 710 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 ARCQ7LC44 396 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 CSGALNACT1Q8TDX6 532 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 NT5C3BQ969T7 300 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 NPY6RQ99463 290 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 DDX23Q9BUQ8 820 aaKnown RBP12.02□□□□□ -0.49
PFDN1-201ENST00000261813 SELENOOQ9BVL4 669 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 LACRTQ9GZZ8 138 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 THAP2Q9H0W7 228 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 ECT2Q9H8V3 914 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 CTTNBP2NLQ9P2B4 639 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 LSM7Q9UK45 103 aaKnown RBP12.02□□□□□ -0.49
PFDN1-201ENST00000261813 AGO1Q9UL18 857 aaKnown RBP12.02□□□□□ -0.49
PFDN1-201ENST00000261813 TLR6Q9Y2C9 796 aa12.02□□□□□ -0.49
PFDN1-201ENST00000261813 TICRRQ7Z2Z1 1910 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SYNJ2BP-COX16A0A087WUM0 186 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 C2CD4BA6NLJ0 364 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SIGLEC16A6NMB1 481 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 USP27XA6NNY8 438 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SLC9A3R1O14745 358 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-201ENST00000261813 NFATC1O95644 943 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 KRT3P12035 628 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 DESP17661 470 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 RFC1P35251 1148 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SULT1E1P49888 294 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 KPNA1P52294 538 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-201ENST00000261813 GNG11P61952 73 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 MLF2Q15773 248 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-201ENST00000261813 ITPRIPL2Q3MIP1 535 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 PLEKHA7Q6IQ23 1121 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 DNAJC24Q6P3W2 148 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 BNIPLQ7Z465 357 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 SLC35G2Q8TBE7 412 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 RXFP2Q8WXD0 754 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 OTUB2Q96DC9 234 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 CHFRQ96EP1 664 aa12.01□□□□□ -0.49
PFDN1-201ENST00000261813 PGAP3Q96FM1 320 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-201ENST00000261813 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms