RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 IFNB1P01574 187 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 RPL22P35268 128 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 CCNFP41002 786 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 INHBCP55103 352 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC25A11Q02978 314 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 BTKQ06187 659 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SULT2A1Q06520 285 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 BST1Q10588 318 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 TAZQ16635 292 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 LGSNQ5TDP6 509 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SCARA3Q6AZY7 606 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 PGM2L1Q6PCE3 622 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SATL1Q86VE3 508 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 MARVELD2Q8N4S9 558 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 ZFRQ96KR1 1074 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 MGAMO43451 1857 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SNNO75324 88 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 F2P00734 622 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 RFC1P35251 1148 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 GPD2P43304 727 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 CDH8P55286 799 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 HPCAP84074 193 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 TMPRSS15P98073 1019 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 GPR162Q16538 588 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 TEX44Q53QW1 395 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 BBS12Q6ZW61 710 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 CATSPER4Q7RTX7 472 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC26A11Q86WA9 606 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 UNC93AQ86WB7 457 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 GSTCDQ8NEC7 633 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 CPXM1Q96SM3 734 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 ADAMTS10Q9H324 1103 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 ZNF510Q9Y2H8 683 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 Q9Y3F1 56 aa11.14□□□□□ -0.63
CHRNA1-201ENST00000261007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 TCRBV9S1A1TA0A576 114 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 MBLAC1A4D2B0 266 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 PRR5-ARHGAP8B1AHC4 643 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 VILLO15195 856 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 PFDN1O60925 122 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 LRCH4O75427 683 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 KRT37O76014 449 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 CD4P01730 458 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ERBB2P04626 1255 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 SNRPAP09012 282 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 SMIM18P0DKX4 95 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ZNF143P52747 638 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 NDST1P52848 882 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 AQP5P55064 265 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 AQP4P55087 323 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ARHGAP8P85298 464 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 PDE1BQ01064 536 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 GAD2Q05329 585 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 CYLC2Q14093 348 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 CCNIQ14094 377 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 RNF111Q6ZNA4 994 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ARCQ7LC44 396 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 LRRC43Q8N309 656 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 RSAD2Q8WXG1 361 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 NMD3Q96D46 503 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 SNX27Q96L92 541 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 CNPY3Q9BT09 278 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 KATNAL1Q9BW62 490 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 Q9H521 79 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 FAM96AQ9H5X1 160 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 RSAD1Q9HA92 442 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 CLIC5Q9NZA1 410 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 XPO7Q9UIA9 1087 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ADAMTS6Q9UKP5 1117 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 HBS1LQ9Y450 684 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 MAD1L1Q9Y6D9 718 aa11.13□□□□□ -0.63
CHRNA1-201ENST00000261007 ARHGAP42A6NI28 874 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 HNRNPRO43390 633 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CPA3P15088 417 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 GPD1P21695 349 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 KDELR1P24390 212 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 PNPLA4P41247 253 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ALDH18A1P54886 795 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TBL3Q12788 808 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 DLG1Q12959 904 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 KBTBD12Q3ZCT8 623 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 OGFRL1Q5TC84 451 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms