RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 CYP4F8P98187 520 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 NRG1Q02297 640 aaPredicted RBP18.36■□□□□ 0.53
CCDC115-201ENST00000259229 SNX1Q13596 522 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 NOMO1Q15155 1222 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 TADA2BQ86TJ2 420 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 ZNF683Q8IZ20 524 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 NKD2Q969F2 451 aaPredicted RBP18.36■□□□□ 0.53
CCDC115-201ENST00000259229 ZNF707Q96C28 371 aaPredicted RBP18.36■□□□□ 0.53
CCDC115-201ENST00000259229 C2orf16Q68DN1 1984 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 DOCK4Q8N1I0 1966 aa18.36■□□□□ 0.53
CCDC115-201ENST00000259229 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 MOCS2O96007 188 aaPredicted RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 HMBSP08397 361 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 POU2F2P09086 479 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 HNRNPA1P09651 372 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 TGM2P21980 687 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 DHX34Q14147 1143 aaKnown RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 TXNDC8Q6A555 127 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 ELMOD1Q8N336 334 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 CORO1BQ9BR76 489 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 KLF16Q9BXK1 252 aaPredicted RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 MAK16Q9BXY0 300 aaKnown RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 DNMT3BQ9UBC3 853 aaKnown RBP18.35■□□□□ 0.53
CCDC115-201ENST00000259229 NEU2Q9Y3R4 380 aa18.35■□□□□ 0.53
CCDC115-201ENST00000259229 MOSPD3O75425 235 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 APOEP02649 317 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 NRIP1P48552 1158 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ZNF135P52742 658 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 VCPP55072 806 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 MLLT6P55198 1093 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TPI1P60174 286 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ZXDBP98169 803 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 DR1Q01658 176 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 GBE1Q04446 702 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 SLC10A2Q12908 348 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 PABPC1LQ4VXU2 614 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 MS4A13Q5J8X5 152 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 STXBP5Q5T5C0 1151 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 NADSYN1Q6IA69 706 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 C14orf80Q86SX3 495 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 JAMLQ86YT9 394 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TTC13Q8NBP0 860 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 WBP2Q969T9 261 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 MRPL38Q96DV4 380 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 BTN2A3PQ96KV6 586 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 EPAS1Q99814 870 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 PRMT1Q99873 361 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TRIM51Q9BSJ1 452 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 SIK2Q9H0K1 926 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ASAH2Q9NR71 780 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ZDHHC7Q9NXF8 308 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 STIM2Q9P246 746 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 A0A1W2PRU2 124 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 MFSD11O43934 449 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 STC2O76061 302 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 HEXIM1O94992 359 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 GJA1P17302 382 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ERCC2P18074 760 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 KPNA1P52294 538 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 PAFAH1B3Q15102 231 aaKnown RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 C1orf228Q6PIY5 440 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 SHKBP1Q8TBC3 707 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 ADAMTS19Q8TE59 1207 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TCEAL4Q96EI5 215 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 C1orf74Q96LT6 269 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 OLFM3Q96PB7 478 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 CYP2S1Q96SQ9 504 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 PARD6BQ9BYG5 372 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 FRMD8P1Q9BZ68 369 aaPredicted RBP18.34■□□□□ 0.53
CCDC115-201ENST00000259229 TLE6Q9H808 572 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 GKN1Q9NS71 199 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 RAB21Q9UL25 225 aa18.34■□□□□ 0.53
CCDC115-201ENST00000259229 GREM1O60565 184 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 MAP3K6O95382 1288 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 KLKB1P03952 638 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 MYL4P12829 197 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 CDC25CP30307 473 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 VSNL1P62760 191 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 SLC5A9Q2M3M2 681 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 PRSS36Q5K4E3 855 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 NUGGCQ68CJ6 796 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 MAATS1Q7Z4T9 603 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 CCDC105Q8IYK2 499 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 NPWQ8N729 165 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 ARL14EPQ8N8R7 260 aaPredicted RBP18.33■□□□□ 0.52
CCDC115-201ENST00000259229 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 CCDC26Q8TAB7 109 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 SEC14L1Q92503 715 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 PLD4Q96BZ4 506 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 RUNDC3BQ96NL0 473 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 PRKD2Q9BZL6 878 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 PRDM16Q9HAZ2 1276 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 TRPC7Q9HCX4 862 aa18.33■□□□□ 0.52
CCDC115-201ENST00000259229 DTLQ9NZJ0 730 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms