RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 COPAP53621 1224 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 BCAT1P54687 386 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 YWHAGP61981 247 aaKnown RBP eCLIP10.79□□□□□ -0.68
VPS50-201ENST00000251739 SLC14A1Q13336 389 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 TMEM215Q68D42 235 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ANKS1BQ7Z6G8 1248 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 C1orf216Q8TAB5 229 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 SPATA20Q8TB22 786 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 SLC35C1Q96A29 364 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 PLD4Q96BZ4 506 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ERLEC1Q96DZ1 483 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 HEXIM2Q96MH2 286 aaKnown RBP10.79□□□□□ -0.68
VPS50-201ENST00000251739 SLC2A11Q9BYW1 496 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ULBP1Q9BZM6 244 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 PRDM16Q9HAZ2 1276 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ITM2CQ9NQX7 267 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ELOVL2Q9NXB9 296 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 SUSD2Q9UGT4 822 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ZMIZ1Q9ULJ6 1067 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 CELSR3Q9NYQ7 3312 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 SLC12A8A0AV02 714 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 CFAP99D6REC4 459 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 O00370 1275 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 XPO1O14980 1071 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 CETN3O15182 167 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 HYAL3O43820 417 aaPredicted RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 DXOO77932 396 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 CAPNS1P04632 268 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 HMBSP08397 361 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 EPB41P11171 864 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 NCAM1P13591 858 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 PRKCHP24723 683 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 PRCPP42785 496 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 TPMTP51580 245 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 PDE4CQ08493 712 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 PNOCQ13519 176 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 CUL2Q13617 745 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 ZNF234Q14588 700 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 STARD3Q14849 445 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 GOLGA7BQ2TAP0 167 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 KIAA1324Q6UXG2 1013 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 RAB44Q7Z6P3 723 aaPredicted RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 KIAA0907Q7Z7F0 614 aaPredicted RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 DENND1CQ8IV53 801 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 FMR1NBQ8N0W7 255 aaPredicted RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 SCML4Q8N228 414 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS50-201ENST00000251739 CADM4Q8NFZ8 388 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 TOE1Q96GM8 510 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 GTPBP2Q9BX10 602 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 KLK13Q9UKR3 277 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 TSPAN16Q9UKR8 245 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 STRIP2Q9ULQ0 834 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 HBS1LQ9Y450 684 aaKnown RBP10.78□□□□□ -0.68
VPS50-201ENST00000251739 PLXNA2O75051 1894 aa10.78□□□□□ -0.68
VPS50-201ENST00000251739 KNTC1P50748 2209 aa10.77□□□□□ -0.68
VPS50-201ENST00000251739 YJEFN3A6XGL0 299 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 E7ENQ6 273 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 H0Y626 953 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 TRIM16O95361 564 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 LATS1O95835 1130 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 IGLV3-27P01718 113 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 SYPP08247 313 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 JUNDP17535 347 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 HLA-FP30511 346 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 ATXN3P54252 364 aaPredicted RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 PMS1P54277 932 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 BNC1Q01954 994 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 ADIGQ0VDE8 80 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 BST2Q10589 180 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 GRIK2Q13002 908 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 CAMK2GQ13555 558 aaPredicted RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 HNRNPDQ14103 355 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 WDR45BQ5MNZ6 344 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 MSANTD2Q6P1R3 559 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 RSRC2Q7L4I2 434 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 TMPRSS6Q8IU80 811 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 HDDC3Q8N4P3 179 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 ENGASEQ8NFI3 743 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 UCMAQ8WVF2 138 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 SORCS1Q8WY21 1168 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 KCTD13Q8WZ19 329 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 NDRG1Q92597 394 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 ZSWIM1Q9BR11 485 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 TMEM245Q9H330 911 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 GDPD2Q9HCC8 539 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 OLA1Q9NTK5 396 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 ATP6V1DQ9Y5K8 247 aa10.77□□□□□ -0.69
VPS50-201ENST00000251739 SMG1Q96Q15 3661 aaKnown RBP10.77□□□□□ -0.69
VPS50-201ENST00000251739 A0A1B0GTW7 788 aa10.76□□□□□ -0.69
VPS50-201ENST00000251739 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms