RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 GABRDO14764 452 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 NRP1O14786 923 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 DNAJC6O75061 913 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 WFS1O76024 890 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 ALDH1A2O94788 518 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 FYNP06241 537 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 MYL2P10916 166 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 MAP3K7CLP57077 242 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SLC8A3P57103 927 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SARNPP82979 210 aaKnown RBP20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 CASC4Q6P4E1 433 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 LRRC8BQ6P9F7 803 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 BZW1Q7L1Q6 419 aaKnown RBP20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SLC2A13Q96QE2 648 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 MIPEPQ99797 713 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SIRPGQ9P1W8 387 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 CCDC195A0A1B0GUA6 201 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 H3BRJ5 948 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 HAUS5O94927 633 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 MLNP12872 115 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 GM2AP17900 193 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 PSMB4P28070 264 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 MAP2K2P36507 400 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 GLUD2P49448 558 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 TKTL1P51854 596 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SESN2P58004 480 aaPredicted RBP20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 WASHC5Q12768 1159 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 CYS1Q717R9 158 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 HACE1Q8IYU2 909 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SIX6OS1Q8N1H7 587 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 E2F7Q96AV8 911 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 PTCD3Q96EY7 689 aaKnown RBP20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 PRDM12Q9H4Q4 367 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 TLE6Q9H808 572 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 CRTAC1Q9NQ79 661 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 ANLNQ9NQW6 1124 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 SEPT10Q9P0V9 454 aa20.12■□□□□ 0.81
CDC42EP1-201ENST00000249014 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 C17orf102A2RUQ5 167 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 SDR42E2A6NKP2 422 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM72CH0Y354 149 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 OPHN1O60890 802 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 AMHP03971 560 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 MGAT1P26572 445 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 CRHR1P34998 444 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 SERPINB9P50453 376 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 TMPRSS15P98073 1019 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 DEUP1Q05D60 604 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 NIPAL4Q0D2K0 466 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 DPYSQ14117 519 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 CHI3L2Q15782 390 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 HSF5Q4G112 596 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 TEX44Q53QW1 395 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM72AQ5TYM5 149 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM72DQ6L9T8 149 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 TLDC1Q6P9B6 456 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 TTC7BQ86TV6 843 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM72BQ86X60 149 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 CCNYQ8ND76 341 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 ADAM32Q8TC27 787 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 WNT8BQ93098 351 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 MED10Q9BTT4 135 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 KRT82Q9NSB4 513 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 NOP53Q9NZM5 478 aaKnown RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 STAP1Q9ULZ2 295 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 I6L893 689 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 CPT1AP50416 773 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 AFF1P51825 1210 aaKnown RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 RFX8Q6ZV50 586 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 ZNF567Q8N184 647 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 NME8Q8N427 588 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 C7orf26Q96N11 449 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 C20orf27Q9GZN8 174 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 EIF2B3Q9NR50 452 aaKnown RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 DDX43Q9NXZ2 648 aaKnown RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 NKX1-2Q9UD57 310 aaPredicted RBP20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 C15orf41Q9Y2V0 281 aa20.11■□□□□ 0.81
CDC42EP1-201ENST00000249014 DCLK1O15075 740 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 RARBP10826 455 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 OCRLQ01968 901 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 PAFAH1B3Q15102 231 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 PDK1Q15118 436 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 BSPRYQ5W0U4 402 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 TIFABQ6ZNK6 161 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 MARK2Q7KZI7 788 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 NUDCD3Q8IVD9 361 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 STKLD1Q8NE28 680 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 GSTCDQ8NEC7 633 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 NSMCE1Q8WV22 266 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 ULBP1Q9BZM6 244 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 TMEM30AQ9NV96 361 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 SF3B1O75533 1304 aaKnown RBP eCLIP20.1■□□□□ 0.812e-17■■■■■ 206.8
CDC42EP1-201ENST00000249014 YJEFN3A6XGL0 299 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 E7ENQ6 273 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 I3L4J1 428 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 EEF2KO00418 725 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 PEX11AO75192 247 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 RPSAP08865 295 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 ZBTB16Q05516 673 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms