RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 WDCPQ9H6R7 721 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 ROPN1Q9HAT0 212 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-219ENST00000641513 TMPRSS4Q9NRS4 437 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 ABCC13Q9NSE7 274 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 PIGVQ9NUD9 493 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 GRHL1Q9NZI5 618 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 GMIPQ9P107 970 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 MTRRQ9UBK8 725 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 MAGED2Q9UNF1 606 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-219ENST00000641513 HEY1Q9Y5J3 304 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 USP3Q9Y6I4 520 aa9.18□□□□□ -0.94
PHGDH-219ENST00000641513 WDR27A2RRH5 827 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 C5orf60A6NFR6 353 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 EEF2KO00418 725 aaKnown RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 NDUFAB1O14561 156 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ADAM12O43184 909 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 TBC1D4O60343 1298 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ENDOD1O94919 500 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 AGTP01019 485 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 IFNB1P01574 187 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 APOC2P02655 101 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 RARGP13631 454 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 PECAM1P16284 738 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ZFXP17010 805 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 GOT1P17174 413 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 TGM2P21980 687 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 AMPD1P23109 780 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 PMS2P54278 862 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ROR1Q01973 937 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 TAF12Q16514 161 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 TNFAIP8L3Q5GJ75 292 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 DENND2CQ68D51 928 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ZDHHC24Q6UX98 284 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 PRUNE1Q86TP1 453 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 MON1AQ86VX9 555 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 VPS52Q8N1B4 723 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 CCDC89Q8N998 374 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 DQX1Q8TE96 717 aaKnown RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 UBLCP1Q8WVY7 318 aaPredicted RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 AUTS2Q8WXX7 1259 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ART4Q93070 314 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 NT5C3BQ969T7 300 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 SNF8Q96H20 258 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 TMEM121Q9BTD3 319 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 VN1R3Q9BXE9 311 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 CCDC134Q9H6E4 229 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 C10orf88Q9H8K7 445 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 SFMBT1Q9UHJ3 866 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 RSPH14Q9UHP6 348 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 NUDT5Q9UKK9 219 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 DRG1Q9Y295 367 aaKnown RBP9.17□□□□□ -0.94
PHGDH-219ENST00000641513 BACE2Q9Y5Z0 518 aa9.17□□□□□ -0.94
PHGDH-219ENST00000641513 SLC38A8A6NNN8 435 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PRRG1O14668 218 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TCEA3O75764 348 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CSPG5O95196 566 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ITGAVP06756 1048 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 RBP3P10745 1247 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ETS1P14921 441 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ITIH2P19823 946 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ELF1P32519 619 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ADRA1BP35368 520 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PPM1AP35813 382 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TUFMP49411 452 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 AIF1P55008 147 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TPI1P60174 286 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 USP46P62068 366 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 DSG1Q02413 1049 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TAF10Q12962 218 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 NOMO1Q15155 1222 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 C6orf118Q5T5N4 469 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 IZUMO3Q5VZ72 239 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PSRC1Q6PGN9 363 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 DRICH1Q6PGQ1 229 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 C16orf59Q7L2K0 433 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 SCD5Q86SK9 330 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CCDC25Q86WR0 208 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PSTKQ8IV42 348 aaKnown RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PQLC3Q8N755 202 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PLD5Q8N7P1 536 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PCDH19Q8TAB3 1148 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 SLC35B2Q8TB61 432 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CCHCR1Q8TD31 782 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 PGAP3Q96FM1 320 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CSPG4P5Q96PW8 444 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 SLC9A7Q96T83 725 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 LBHD1Q9BQE6 289 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-219ENST00000641513 TKTL2Q9H0I9 626 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 EPB41L4BQ9H329 900 aa9.16□□□□□ -0.94
PHGDH-219ENST00000641513 CRISPLD1Q9H336 500 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms