RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 PMS2CLQ68D20 193 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 FMNL3Q8IVF7 1028 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 SORCS1Q8WY21 1168 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 NAA15Q9BXJ9 866 aaKnown RBP17.15■□□□□ 0.34
COLCA2-206ENST00000638573 UBXN6Q9BZV1 441 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 NLRC4Q9NPP4 1024 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
COLCA2-206ENST00000638573 NCOR2Q9Y618 2525 aa17.15■□□□□ 0.34
COLCA2-206ENST00000638573 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
COLCA2-206ENST00000638573 A0A1W2PQC6 194 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 SLC30A4O14863 429 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 PENKP01210 267 aaPredicted RBP17.14■□□□□ 0.33
COLCA2-206ENST00000638573 ZNF806P0C7X5 589 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
COLCA2-206ENST00000638573 HOXB2P14652 356 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 P2RY2P41231 377 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 DGKGP49619 791 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 PSEN1P49768 467 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 DAOAP59103 153 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 GOLGA8FQ08AF8 430 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 GOLGA8DPQ0D2H9 430 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 MEA1Q16626 185 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 MAP7D1Q3KQU3 841 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
COLCA2-206ENST00000638573 DENND1BQ6P3S1 775 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 FAM71AQ8IYT1 594 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 PGBD3Q8N328 593 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 SLC35F5Q8WV83 523 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
COLCA2-206ENST00000638573 MIS12Q9H081 205 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 FSCN3Q9NQT6 498 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 SPTBN2O15020 2390 aa17.14■□□□□ 0.33
COLCA2-206ENST00000638573 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 FAM170AA1A519 330 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 BCLAF3A2AJT9 711 aaKnown RBP17.13■□□□□ 0.33
COLCA2-206ENST00000638573 CBFA2T2O43439 604 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 STAT1P42224 750 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 PTGER3P43115 390 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 DHPSP49366 369 aaPredicted RBP17.13■□□□□ 0.33
COLCA2-206ENST00000638573 ELF2Q15723 593 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 CHPFQ8IZ52 775 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 ABCA7Q8IZY2 2146 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 SIX6OS1Q8N1H7 587 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 ZNF276Q8N554 614 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 C12orf50Q8NA57 414 aaPredicted RBP17.13■□□□□ 0.33
COLCA2-206ENST00000638573 NETO1Q8TDF5 533 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 ZNF606Q8WXB4 792 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 MYEOVQ96EZ4 313 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 LOXL4Q96JB6 756 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 XPO6Q96QU8 1125 aaKnown RBP17.13■□□□□ 0.33
COLCA2-206ENST00000638573 IFNKQ9P0W0 207 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 CALCOCO1Q9P1Z2 691 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 WDR35Q9P2L0 1181 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 TJP2Q9UDY2 1190 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 CEP83Q9Y592 693 aa17.13■□□□□ 0.33
COLCA2-206ENST00000638573 EPHB6O15197 1021 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 NDUFV2P19404 249 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 NTSR1P30989 418 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 KRT9P35527 623 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 SOX5P35711 763 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 COG7P83436 770 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 NR1I3Q14994 352 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 TRIP4Q15650 581 aaPredicted RBP17.12■□□□□ 0.33
COLCA2-206ENST00000638573 TMEM215Q68D42 235 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 ARHGAP18Q8N392 663 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 KCTD13Q8WZ19 329 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 RTKNQ9BST9 563 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 POLMQ9NP87 494 aaPredicted RBP17.12■□□□□ 0.33
COLCA2-206ENST00000638573 TMEM74BQ9NUR3 256 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 FBXO10Q9UK96 956 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 STRIP2Q9ULQ0 834 aa17.12■□□□□ 0.33
COLCA2-206ENST00000638573 ALDH1A2O94788 518 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 GFPT2O94808 682 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 FYNP06241 537 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 CLCN1P35523 988 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 JAM2P57087 298 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 RFWD3Q6PCD5 774 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 SLC47A2Q86VL8 602 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 CACUL1Q86Y37 369 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 CCDC26Q8TAB7 109 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 ADAM32Q8TC27 787 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 WFDC5Q8TCV5 224 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
COLCA2-206ENST00000638573 PIGKQ92643 395 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 PIWIL1Q96J94 861 aaKnown RBP17.11■□□□□ 0.33
COLCA2-206ENST00000638573 NOX5Q96PH1 765 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 STARD13Q9Y3M8 1113 aa17.11■□□□□ 0.33
COLCA2-206ENST00000638573 CYP11B1P15538 503 aa17.1■□□□□ 0.33
COLCA2-206ENST00000638573 HOXD9P28356 352 aaPredicted RBP17.1■□□□□ 0.33
COLCA2-206ENST00000638573 IL12RB1P42701 662 aa17.1■□□□□ 0.33
COLCA2-206ENST00000638573 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
COLCA2-206ENST00000638573 FOXK2Q01167 660 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms