RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ACOX2Q99424 681 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 SLC2A11Q9BYW1 496 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 DUSP15Q9H1R2 295 aaPredicted RBP14.37□□□□□ -0.11
PNKP-228ENST00000637325 VPS16Q9H269 839 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 SYNCQ9H7C4 482 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 POPDC2Q9HBU9 364 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 STOML2Q9UJZ1 356 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 HCN2Q9UL51 889 aa14.37□□□□□ -0.11
PNKP-228ENST00000637325 ACSL4O60488 711 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 FOXD2O60548 495 aaPredicted RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 FYNP06241 537 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 PNMA6AP0CW24 399 aaPredicted RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 SDHBP21912 280 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 TGM1P22735 817 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 CLCN1P35523 988 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 YWHAZP63104 245 aaKnown RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 KCNMA1Q12791 1236 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 CSRP2Q16527 193 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 GEN1Q17RS7 908 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 FKBP15Q5T1M5 1219 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 OR6B2Q6IFH4 312 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 BEND5Q7L4P6 421 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 ADAM32Q8TC27 787 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 RLN3Q8WXF3 142 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 RMDN1Q96DB5 314 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 ERLEC1Q96DZ1 483 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 P2RY11Q96G91 374 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 PIWIL1Q96J94 861 aaKnown RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 LHX5Q9H2C1 402 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 FANCLQ9NW38 375 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 CDV3Q9UKY7 258 aaKnown RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 CLEC4EQ9ULY5 219 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 TLR6Q9Y2C9 796 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 PCDHGA5Q9Y5G8 931 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 FHOD1Q9Y613 1164 aa14.36□□□□□ -0.11
PNKP-228ENST00000637325 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
PNKP-228ENST00000637325 GOLGA6L7A0A1B0GV03 622 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 TYW5A2RUC4 315 aaKnown RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 GFRA2O00451 464 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 NPC1O15118 1278 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 IRAK2O43187 625 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 TIMM44O43615 452 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 TBL1XO60907 577 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 MOCS2O96007 188 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 IGLV3-27P01718 113 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 APOEP02649 317 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 CDK11BP21127 795 aaKnown RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 HOXD9P28356 352 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 CREB5Q02930 508 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 NNTQ13423 1086 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 PUM1Q14671 1186 aaKnown RBP eCLIP14.35□□□□□ -0.11
PNKP-228ENST00000637325 STARD3Q14849 445 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 KRT31Q15323 416 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 CCDC6Q16204 474 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 EFHC1Q5JVL4 640 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 SYPL2Q5VXT5 272 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 RFWD3Q6PCD5 774 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 C11orf57Q6ZUT1 292 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 WDTC1Q8N5D0 677 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 C1orf131Q8NDD1 294 aaKnown RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 AZIN2Q96A70 460 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 FCRL2Q96LA5 508 aaPredicted RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 CPXM1Q96SM3 734 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 FAM204AQ9H8W3 233 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 ELOVL2Q9NXB9 296 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 SLC12A6Q9UHW9 1150 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.35□□□□□ -0.11
PNKP-228ENST00000637325 STON1Q9Y6Q2 735 aa14.35□□□□□ -0.11
PNKP-228ENST00000637325 TNRC6BQ9UPQ9 1833 aaKnown RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 A0A1W2PQF6 199 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 WASH3PC4AMC7 463 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 SYNCRIPO60506 623 aaKnown RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 TRUB2O95900 331 aaKnown RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 GLI1P08151 1106 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 UCHL3P15374 230 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 GABRG2P18507 467 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 BCKDHBP21953 392 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 MPLP40238 635 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 P2RY2P41231 377 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 DHPSP49366 369 aaPredicted RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 CDK17Q00537 523 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 MYL5Q02045 173 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 EIF4HQ15056 248 aaKnown RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 AASDHQ4L235 1098 aaPredicted RBP14.34□□□□□ -0.11
PNKP-228ENST00000637325 DCAF6Q58WW2 860 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 PIK3R6Q5UE93 754 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 CDKAL1Q5VV42 579 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 DPY19L2P1Q6NXN4 242 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 LPCAT2Q7L5N7 544 aa14.34□□□□□ -0.11
PNKP-228ENST00000637325 HJURPQ8NCD3 748 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms