RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	ZBED5	Q49AG3	693 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	RABGAP1L	Q5R372	815 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	PRAMEF18	Q5VWM3	479 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	KRT39	Q6A163	491 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SWSAP1	Q6NVH7	229 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ZFP1	Q6P2D0	407 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	IYD	Q6PHW0	289 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	GADL1	Q6ZQY3	521 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	GET4	Q7L5D6	327 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	PRUNE1	Q86TP1	453 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	PRPF39	Q86UA1	669 aa	Known RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	GPR180	Q86V85	440 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	CCDC33	Q8N5R6	958 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC25A41	Q8N5S1	370 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	CXorf38	Q8TB03	319 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ZNF641	Q96N77	438 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	FERMT1	Q9BQL6	677 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	CBWD1	Q9BRT8	395 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	EHD1	Q9H4M9	534 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	PCIF1	Q9H4Z3	704 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	TMEM8A	Q9HCN3	771 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ARMCX1	Q9P291	453 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SEPT3	Q9UH03	358 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	BCAP29	Q9UHQ4	241 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	ERGIC3	Q9Y282	383 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC30A1	Q9Y6M5	507 aa		11.1	□□□□□ -0.63
CHD2-223	ENST00000636306		A0A0G2JLL6	359 aa	Predicted RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306		A0A1W2PPM1	405 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	TRIM64C	A6NLI5	447 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	NOTO	A8MTQ0	251 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	HNRNPDL	O14979	420 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	GAS2	O43903	313 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	FAM189A1	O60320	539 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	TFPT	P0C1Z6	253 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	TTK	P33981	857 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	NAMPT	P43490	491 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	ADGRE1	Q14246	886 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	EMC2	Q15006	297 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	PSMD6	Q15008	389 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	CCDC14	Q49A88	953 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	DCAF6	Q58WW2	860 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	SMYD5	Q6GMV2	418 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	SLFN12L	Q6IEE8	588 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	AMIGO2	Q86SJ2	522 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	ALYREF	Q86V81	257 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	MMAA	Q8IVH4	418 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	GPD1L	Q8N335	351 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	OR7G1	Q8NGA0	311 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	TBC1D15	Q8TC07	691 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	CALML6	Q8TD86	181 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	TCP10L	Q8TDR4	215 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	C1orf54	Q8WWF1	131 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	PSPC1	Q8WXF1	523 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC7A3	Q8WY07	619 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	POMGNT1	Q8WZA1	660 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	THAP11	Q96EK4	314 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	CNBD2	Q96M20	576 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	NT5C1B	Q96P26	610 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	AGPAT1	Q99943	283 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	SPATC1L	Q9H0A9	340 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	BCAS3	Q9H6U6	928 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	MOV10	Q9HCE1	1003 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	SAYSD1	Q9NPB0	183 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	GPRC5C	Q9NQ84	441 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	NRBP2	Q9NSY0	501 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	RNF181	Q9P0P0	153 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	APPL1	Q9UKG1	709 aa		11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	POLR2A	P24928	1970 aa	Known RBP	11.09	□□□□□ -0.63
CHD2-223	ENST00000636306	WDR91	A4D1P6	747 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	CYP26A1	O43174	497 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	RSL1D1	O76021	490 aa	Known RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	RGS20	O76081	388 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	ATG7	O95352	703 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	OSBP	P22059	807 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	LIG4	P49917	911 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	TXNL4A	P83876	142 aa	Known RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	KDSR	Q06136	332 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	PPIL2	Q13356	520 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	OASL	Q15646	514 aa	Known RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	CCNG2	Q16589	344 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	NANOGP8	Q6NSW7	305 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	CYP4F22	Q6NT55	531 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	ADGRD1	Q6QNK2	874 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	USP50	Q70EL3	339 aa	Predicted RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	FASTKD5	Q7L8L6	764 aa	Known RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	GPR141	Q7Z602	305 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	POU5F2	Q8N7G0	328 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	ATP6V0D2	Q8N8Y2	350 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	RDH13	Q8NBN7	331 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	ZC3H15	Q8WU90	426 aa	Known RBP	11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	CCDC127	Q96BQ5	260 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	MED30	Q96HR3	178 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	FBXL18	Q96ME1	805 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	DHRS4	Q9BTZ2	278 aa		11.08	□□□□□ -0.64
CHD2-223	ENST00000636306	STN1	Q9H668	368 aa	Known RBP	11.08	□□□□□ -0.64

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