RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 PPM1KQ8N3J5 372 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 DHTKD1Q96HY7 919 aaPredicted RBP13.18□□□□□ -0.3
PTPN11-206ENST00000635652 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
PTPN11-206ENST00000635652 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
PTPN11-206ENST00000635652 THAP10Q9P2Z0 257 aaPredicted RBP13.18□□□□□ -0.3
PTPN11-206ENST00000635652 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
PTPN11-206ENST00000635652 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 O00370 1275 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 TIMM44O43615 452 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 SYPP08247 313 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 GNSP15586 552 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 CD6P30203 668 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 RGS7P49802 495 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 ZNF234Q14588 700 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 EIF4HQ15056 248 aaKnown RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 WDR45BQ5MNZ6 344 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 SORCS1Q8WY21 1168 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 KCTD13Q8WZ19 329 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 TFAP2BQ92481 460 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 TMA16Q96EY4 203 aaKnown RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 SIPA1Q96FS4 1042 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 TOE1Q96GM8 510 aaKnown RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 CEP63Q96MT8 703 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
PTPN11-206ENST00000635652 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 CNGB3Q9NQW8 809 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 MAN1B1Q9UKM7 699 aa13.17□□□□□ -0.3
PTPN11-206ENST00000635652 MEI4A8MW99 385 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 MSI1O43347 362 aaKnown RBP13.16□□□□□ -0.3
PTPN11-206ENST00000635652 OPHN1O60890 802 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 EPHX1P07099 455 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 PAEPP09466 180 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 ACADMP11310 421 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 SPINK2P20155 84 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 MAOBP27338 520 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 PPP1R2P41236 205 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 DAOAP59103 153 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 ADGRF1Q5T601 910 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 TMEM215Q68D42 235 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 RRAGAQ7L523 313 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
PTPN11-206ENST00000635652 CACUL1Q86Y37 369 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 FAM217AQ8IXS0 508 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 MINDY1Q8N5J2 469 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 UBR7Q8N806 425 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
PTPN11-206ENST00000635652 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 GPR174Q9BXC1 333 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 ITM2CQ9NQX7 267 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 CKAP5Q14008 2032 aa13.16□□□□□ -0.3
PTPN11-206ENST00000635652 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 KCNJ18B7U540 433 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 M0QYV0 167 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 CALCAP01258 141 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 NCAM1P13591 858 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 PRKCHP24723 683 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 HOXD9P28356 352 aaPredicted RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 OXTRP30559 389 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 TPMTP51580 245 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 ZNF445P59923 1031 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 ENPP2Q13822 863 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 STILQ15468 1287 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 CNGA2Q16280 664 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 PKDCCQ504Y2 493 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 FNDC3BQ53EP0 1204 aaKnown RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 PMF1Q6P1K2 205 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 OR2I1PQ8NGU4 316 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 SLC35F5Q8WV83 523 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 NELFBQ8WX92 580 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 KAT5Q92993 513 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 MIS12Q9H081 205 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 MIR1-1HGQ9H1L0 117 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
PTPN11-206ENST00000635652 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 PLA2G4CQ9UP65 541 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
PTPN11-206ENST00000635652 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 BICDL2A1A5D9 508 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 BIN1O00499 593 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 PMM2O15305 246 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 LATS1O95835 1130 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
PTPN11-206ENST00000635652 HLA-EP13747 358 aa13.14□□□□□ -0.31
PTPN11-206ENST00000635652 HLA-FP30511 346 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms