RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 PSMC3IPQ9P2W1 217 aaPredicted RBP22.81■■□□□ 1.24
PNKP-220ENST00000627232 GGA2Q9UJY4 613 aa22.81■■□□□ 1.24
PNKP-220ENST00000627232 CREB3O43889 395 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 B4GALT3O60512 393 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 OAZ2O95190 189 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 SSTR1P30872 391 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 FDFT1P37268 417 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 ELK3P41970 407 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 GLUD2P49448 558 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 BSPRYQ5W0U4 402 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 TRABD2AQ86V40 505 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 LRRC39Q96DD0 335 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 COLEC11Q9BWP8 271 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 TMPRSS4Q9NRS4 437 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 MFHAS1Q9Y4C4 1052 aa22.8■■□□□ 1.24
PNKP-220ENST00000627232 A0A0A0MRY4 1105 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 RASA4BC9J798 803 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 RASA4O43374 803 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 STK10O94804 968 aaKnown RBP22.79■■□□□ 1.24
PNKP-220ENST00000627232 PPARDQ03181 441 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 SEMA5AQ13591 1074 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 CAPN12Q6ZSI9 719 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 ARHGEF18Q6ZSZ5 1173 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 DCP1BQ8IZD4 617 aaKnown RBP22.79■■□□□ 1.24
PNKP-220ENST00000627232 FBF1Q8TES7 1133 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 SPATA13Q96N96 652 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 ZNF317Q96PQ6 595 aaPredicted RBP22.79■■□□□ 1.24
PNKP-220ENST00000627232 FAM193BQ96PV7 902 aaPredicted RBP22.79■■□□□ 1.24
PNKP-220ENST00000627232 DHRS4Q9BTZ2 278 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.79■■□□□ 1.24
PNKP-220ENST00000627232 ZCWPW1Q9H0M4 648 aa22.79■■□□□ 1.24
PNKP-220ENST00000627232 F8W810 466 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 PPP1R12AO14974 1030 aaPredicted RBP22.78■■□□□ 1.24
PNKP-220ENST00000627232 GSTA2P09210 222 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 VAV1P15498 845 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 CREB1P16220 341 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 SLC18A1P54219 525 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 TPI1P60174 286 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 ADGRD1Q6QNK2 874 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 SRRM1Q8IYB3 904 aaKnown RBP22.78■■□□□ 1.24
PNKP-220ENST00000627232 ADAM32Q8TC27 787 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 WDCPQ9H6R7 721 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 KCNK9Q9NPC2 374 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 CHMP2BQ9UQN3 213 aa22.78■■□□□ 1.24
PNKP-220ENST00000627232 SYN3O14994 580 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 METTL18O95568 372 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 DRD4P21917 467 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 CYP2C18P33260 490 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 CDK16Q00536 496 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 ANKRD20A2Q5SQ80 823 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 ANKRD20A1Q5TYW2 823 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 ANKRD20A3Q5VUR7 823 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 MICALCLQ6ZW33 695 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 CTU1Q7Z7A3 348 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 ZNF296Q8WUU4 475 aaPredicted RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 EDEM1Q92611 657 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 CYTH2Q99418 400 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 PRMT1Q99873 361 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 FAM107BQ9H098 131 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 TMEM51Q9NW97 253 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 ATXN2Q99700 1313 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 TNFRSF10BO14763 440 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 NCAM2O15394 837 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 OPHN1O60890 802 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 IGLV3-25P01717 112 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 APRTP07741 180 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 MAGEA3P43357 314 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 OR1G1P47890 313 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 VEGFBP49765 207 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 PLEKHG4Q58EX7 1191 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 FAXCQ5TGI0 409 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 TAC4Q86UU9 113 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 CAND1Q86VP6 1230 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 IGDCC3Q8IVU1 814 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 FAM126BQ8IXS8 530 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 DQX1Q8TE96 717 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 FUBP3Q96I24 572 aaKnown RBP eCLIP22.77■■□□□ 1.24
PNKP-220ENST00000627232 EPAS1Q99814 870 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 BRD8Q9H0E9 1235 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 TRABDQ9H4I3 376 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 XAB2Q9HCS7 855 aaKnown RBP22.77■■□□□ 1.24
PNKP-220ENST00000627232 ANLNQ9NQW6 1124 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 ABCC13Q9NSE7 274 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 NKIRAS1Q9NYS0 192 aa22.77■■□□□ 1.24
PNKP-220ENST00000627232 MYO16Q9Y6X6 1858 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 FAM72CH0Y354 149 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 DNM1LO00429 736 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 ENPP3O14638 875 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 PRPF4O43172 522 aaKnown RBP eCLIP22.76■■□□□ 1.236e-7■■■■□ 23.2
PNKP-220ENST00000627232 ERCC2P18074 760 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 GRIK1P39086 918 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 SARNPP82979 210 aaKnown RBP22.76■■□□□ 1.23
PNKP-220ENST00000627232 PKN2Q16513 984 aaKnown RBP22.76■■□□□ 1.23
PNKP-220ENST00000627232 NFE2Q16621 373 aaPredicted RBP22.76■■□□□ 1.23
PNKP-220ENST00000627232 FAM72AQ5TYM5 149 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 FAM72DQ6L9T8 149 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 CPLX4Q7Z7G2 160 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 FAM72BQ86X60 149 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 LRRN4Q8WUT4 740 aa22.76■■□□□ 1.23
PNKP-220ENST00000627232 LGMNQ99538 433 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms