RNA–Protein interactions for RNA: ENST00000625349.2

LUC7L3-223, Transcript of LUC7 like 3 pre-mRNA splicing factor, human

TSL 2 BASIC

Gene LUC7L3, Length 408 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LUC7L3-223	ENST00000625349	HES6	Q96HZ4	224 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZC3H10	Q96K80	434 aa	Known RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HSFY1	Q96LI6	401 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HNRNPAB	Q99729	332 aa	Known RBP	13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZSWIM1	Q9BR11	485 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ACBD6	Q9BR61	282 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HPS4	Q9NQG7	708 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HESX1	Q9UBX0	185 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	AMFR	Q9UKV5	643 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CDH9	Q9ULB4	789 aa		13.2	□□□□□ -0.3
LUC7L3-223	ENST00000625349	DENND4C	Q5VZ89	1909 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TCRBV5S1A1T	A0A578	114 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CCDC66	A2RUB6	948 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SIGLEC16	A6NMB1	481 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	MYO1F	O00160	1098 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	RIOK3	O14730	519 aa	Known RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	BUB1B	O60566	1050 aa	Predicted RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HAPLN1	P10915	354 aa	Predicted RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ABCB4	P21439	1286 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	DDX6	P26196	483 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	AVPR1A	P37288	418 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PXN	P49023	591 aa	Predicted RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SLC8A3	P57103	927 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	MAMLD1	Q13495	774 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TAF12	Q16514	161 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	STPG1	Q5TH74	334 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SCARA5	Q6ZMJ2	495 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PEX26	Q7Z412	305 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	DAAM2	Q86T65	1068 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TMEM150A	Q86TG1	271 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TMEM110	Q86TL2	294 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	NT5DC3	Q86UY8	548 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	METTL23	Q86XA0	190 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	THEM5	Q8N1Q8	247 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PDCL2	Q8N4E4	241 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CAMKK1	Q8N5S9	505 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	NIPA2	Q8N8Q9	360 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	OR6B3	Q8NGW1	331 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SLC35F5	Q8WV83	523 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CPA5	Q8WXQ8	436 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	C18orf8	Q96DM3	657 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	MRPL45	Q9BRJ2	306 aa	Known RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SELENOO	Q9BVL4	669 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	NUP85	Q9BW27	656 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SMG9	Q9H0W8	520 aa	Known RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	KIF9	Q9HAQ2	790 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	RXFP3	Q9NSD7	469 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	L1RE1	Q9UN81	338 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TFR2	Q9UP52	801 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SLC8A2	Q9UPR5	921 aa		13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZNF638	Q14966	1978 aa	Known RBP	13.19	□□□□□ -0.3
LUC7L3-223	ENST00000625349	OTOL1	A6NHN0	477 aa	Predicted RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TMCO5B	A8MYB1	307 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	BUB1	O43683	1085 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	F11	P03951	625 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ATP1A1	P05023	1023 aa	Known RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	HMGA1	P17096	107 aa	Known RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	DRD1	P21728	446 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	KCNA4	P22459	653 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	BRD2	P25440	801 aa	Known RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	MPL	P40238	635 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	BCAT1	P54687	386 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PIGH	Q14442	188 aa	Predicted RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CCDC6	Q16204	474 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PPP2R5E	Q16537	467 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	FBXO43	Q4G163	708 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZNF394	Q53GI3	561 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	LRRC38	Q5VT99	294 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	WSCD1	Q658N2	575 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	LRRTM3	Q86VH5	581 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	UBL4B	Q8N7F7	174 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	GIPC2	Q8TF65	315 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	USP13	Q92995	863 aa	Predicted RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ELMO3	Q96BJ8	720 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ARHGEF26	Q96DR7	871 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TWNK	Q96RR1	684 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	OSBPL9	Q96SU4	736 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	NAP1L3	Q99457	506 aa	Predicted RBP	13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	SLC4A5	Q9BY07	1137 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CARD9	Q9H257	536 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	EBF3	Q9H4W6	596 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	VPS45	Q9NRW7	570 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TDP1	Q9NUW8	608 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	IP6K2	Q9UHH9	426 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CCL26	Q9Y258	94 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ALG6	Q9Y672	507 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	EML5	Q05BV3	1969 aa		13.18	□□□□□ -0.3
LUC7L3-223	ENST00000625349	TMEM191C	A6NGB0	347 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	ZZEF1	O43149	2961 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	EGF	P01133	1207 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PTPN1	P18031	435 aa	Known RBP	13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	RRM1	P23921	792 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CTNNA2	P26232	953 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PAFAH1B1	P43034	410 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	BST2	Q10589	180 aa	Known RBP	13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PDGFRL	Q15198	375 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PLK5	Q496M5	336 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	CFAP221	Q4G0U5	840 aa		13.17	□□□□□ -0.3
LUC7L3-223	ENST00000625349	PPP1R15B	Q5SWA1	713 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms