RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KCTD15Q96SI1 283 aaPredicted RBP18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 CALN1Q9BXU9 219 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 MAGEB5Q9BZ81 275 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 HELZP42694 1942 aaKnown RBP18.48■□□□□ 0.55
PTCHD3-202ENST00000622555 TRAV19A0A0A6YYK7 116 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 C3orf70A6NLC5 250 aaPredicted RBP18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 I6L893 689 aaPredicted RBP18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 ZNF197O14709 1029 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 MOSPD3O75425 235 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 IGLV3-27P01718 113 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 FGGP02679 453 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 CD48P09326 243 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 L1CAMP32004 1257 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 PAFAH1B1P43034 410 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 ARSEP51690 589 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 COPS2P61201 443 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 COG7P83436 770 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 RING1Q06587 406 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 ADAM15Q13444 863 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 DPYSL2Q16555 572 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 PRSS36Q5K4E3 855 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 GPR158Q5T848 1215 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 PYROXD2Q8N2H3 581 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 RASGEF1CQ8N431 466 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 SMPD4Q9NXE4 827 aa18.47■□□□□ 0.55
PTCHD3-202ENST00000622555 KCNU1A8MYU2 1149 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 PGRMC1O00264 195 aaKnown RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 OLFM2O95897 454 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 CKMP06732 381 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 POU3F3P20264 500 aaPredicted RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 DDX6P26196 483 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 CDKN2BP42772 138 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 DPYSL3Q14195 570 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 NUGGCQ68CJ6 796 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 EP400NLQ6ZTU2 488 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 ANKS1BQ7Z6G8 1248 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 MICALL1Q8N3F8 863 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 ACTRT1Q8TDG2 376 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 GAS2L1Q99501 681 aaPredicted RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 KLF16Q9BXK1 252 aaPredicted RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 OSBPL8Q9BZF1 889 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 SLITRK6Q9H5Y7 841 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 GKN1Q9NS71 199 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 MTMR10Q9NXD2 777 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 RNF14Q9UBS8 474 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC12A6Q9UHW9 1150 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 MRPS23Q9Y3D9 190 aaKnown RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 PAGE1O75459 146 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 IRF1P10914 325 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 PFKLP17858 780 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 KCNQ1P51787 676 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 CKAP4Q07065 602 aaKnown RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 LONRF2Q1L5Z9 754 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 TFDP3Q5H9I0 405 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 KAZNQ674X7 775 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 SYCE2Q6PIF2 218 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 UNC45BQ8IWX7 931 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 ATP6V0D2Q8N8Y2 350 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 ING5Q8WYH8 240 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 PLD4Q96BZ4 506 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 HAPLN3Q96S86 360 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 HEMGNQ9BXL5 484 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 SLC46A2Q9BY10 475 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 SIK2Q9H0K1 926 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 TASP1Q9H6P5 420 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 TTC7AQ9ULT0 858 aaPredicted RBP18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 CPQQ9Y646 472 aa18.46■□□□□ 0.55
PTCHD3-202ENST00000622555 PDE2AO00408 941 aaPredicted RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 KRT10P13645 584 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 HOXB8P17481 243 aaPredicted RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 MMRN1Q13201 1228 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 PPP2R5EQ16537 467 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 ADAT2Q7Z6V5 191 aaKnown RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 GPR149Q86SP6 731 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 SLC13A5Q86YT5 568 aaPredicted RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 FAM71BQ8TC56 605 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 BTN2A3PQ96KV6 586 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 NAP1L3Q99457 506 aaPredicted RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 CLDND1Q9NY35 253 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 XPO7Q9UIA9 1087 aaKnown RBP18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 SNX10Q9Y5X0 201 aa18.45■□□□□ 0.54
PTCHD3-202ENST00000622555 hCG_1818297A0A087WSY0 165 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 CREB3O43889 395 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 STC2O76061 302 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 CEBPBP17676 345 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 PTPN7P35236 360 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 GGCXP38435 758 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 ARL4AP40617 200 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 HARS2P49590 506 aaKnown RBP18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 SLC7A9P82251 487 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 NAA30Q147X3 362 aaPredicted RBP18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 CLUL1Q15846 466 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 ITFG1Q8TB96 612 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 ZFRQ96KR1 1074 aaKnown RBP18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 ZNF670Q9BS34 389 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 HERPUD2Q9BSE4 406 aa18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 MAK16Q9BXY0 300 aaKnown RBP18.44■□□□□ 0.54
PTCHD3-202ENST00000622555 OSBPL2Q9H1P3 480 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms