RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 PALM2Q8IXS6 379 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 WDR83Q9BRX9 315 aaKnown RBP19.69■□□□□ 0.74
PSPC1-206ENST00000619300 PPCSQ9HAB8 311 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 TBK1Q9UHD2 729 aa19.69■□□□□ 0.74
PSPC1-206ENST00000619300 TNFRSF10BO14763 440 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 SYN3O14994 580 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 TSHRP16473 764 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 GCAP28676 217 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 SYCP2LQ5T4T6 812 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 HTR3CQ8WXA8 447 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 MAML1Q92585 1016 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 CASD1Q96PB1 797 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 PAK6Q9NQU5 681 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-206ENST00000619300 GMNCA6NCL1 334 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 NDUFAB1O14561 156 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 DCLK1O15075 740 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 MYCP01106 439 aaPredicted RBP19.68■□□□□ 0.74
PSPC1-206ENST00000619300 AMHP03971 560 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 SSTR1P30872 391 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 SLC5A3P53794 718 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 PDK1Q15118 436 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 FAXCQ5TGI0 409 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 TADA2BQ86TJ2 420 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 VPS52Q8N1B4 723 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 APBB2Q92870 758 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 LGMNQ99538 433 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 RABGEF1Q9UJ41 708 aa19.68■□□□□ 0.74
PSPC1-206ENST00000619300 POC1B-GALNT4F8VUJ3 575 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 METTL18O95568 372 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 APRTP07741 180 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 MTM1Q13496 603 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 NFE2Q16621 373 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-206ENST00000619300 TAC4Q86UU9 113 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 NLRP14Q86W24 1093 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 DQX1Q8TE96 717 aaKnown RBP19.67■□□□□ 0.74
PSPC1-206ENST00000619300 XPO6Q96QU8 1125 aaKnown RBP19.67■□□□□ 0.74
PSPC1-206ENST00000619300 CCT8L2Q96SF2 557 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 TKTL2Q9H0I9 626 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 ABCC13Q9NSE7 274 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 ABI2Q9NYB9 513 aaPredicted RBP19.67■□□□□ 0.74
PSPC1-206ENST00000619300 SLC24A2Q9UI40 661 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 ADAM28Q9UKQ2 775 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 LRFN2Q9ULH4 789 aa19.67■□□□□ 0.74
PSPC1-206ENST00000619300 FOXO6A8MYZ6 492 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ALDH2P05091 517 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 VAV1P15498 845 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 CREB1P16220 341 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ERCC2P18074 760 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ELK3P41970 407 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ZNF135P52742 658 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 TPI1P60174 286 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 YWHAGP61981 247 aaKnown RBP eCLIP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 PRKD1Q15139 912 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 RASA2Q15283 850 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 VARS2Q5ST30 1063 aaKnown RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ARHGEF18Q6ZSZ5 1173 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 PDZD4Q76G19 769 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 IGDCC3Q8IVU1 814 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 SCN4BQ8IWT1 228 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 MCUQ8NE86 351 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 FUBP3Q96I24 572 aaKnown RBP eCLIP19.66■□□□□ 0.741e-7■■■□□ 16.8
PSPC1-206ENST00000619300 INTS9Q9NV88 658 aaKnown RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 FETUBQ9UGM5 382 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ACTL7BQ9Y614 415 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 TEX264Q9Y6I9 313 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 PQBP1O60828 265 aaKnown RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 AVILO75366 819 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 GLUD2P49448 558 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 IFRD2Q12894 506 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 NR1H3Q13133 447 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 MTFR1Q15390 333 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 ATXN2LQ8WWM7 1075 aaKnown RBP19.66■□□□□ 0.74
PSPC1-206ENST00000619300 FERMT1Q9BQL6 677 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 OR12D3Q9UGF7 316 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 OGDHLQ9ULD0 1010 aa19.66■□□□□ 0.74
PSPC1-206ENST00000619300 A0A0A0MRY4 1105 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 PPP1R12AO14974 1030 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-206ENST00000619300 FAM107AO95990 144 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 IGLV3-25P01717 112 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 GATMP50440 423 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 GEMIN4P57678 1058 aaKnown RBP19.65■□□□□ 0.74
PSPC1-206ENST00000619300 AP1B1Q10567 949 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 EIF4EBP2Q13542 120 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-206ENST00000619300 MRPL58Q14197 206 aaKnown RBP19.65■□□□□ 0.74
PSPC1-206ENST00000619300 TMED2Q15363 201 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 ANKRD20A2Q5SQ80 823 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 ANKRD20A1Q5TYW2 823 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 FAM171A1Q5VUB5 890 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 ANKRD20A3Q5VUR7 823 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 BTBD8Q5XKL5 378 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 VSTM1Q6UX27 236 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 CAND1Q86VP6 1230 aaKnown RBP19.65■□□□□ 0.74
PSPC1-206ENST00000619300 CEP57Q86XR8 500 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 NETO2Q8NC67 525 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 RNF34Q969K3 372 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 SPATA13Q96N96 652 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
PSPC1-206ENST00000619300 ACSS3Q9H6R3 686 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms