RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 APTXQ7Z2E3 356 aaKnown RBP16.66■□□□□ 0.26
BRCA1-228ENST00000618469 TAC4Q86UU9 113 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 WDTC1Q8N5D0 677 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 C12orf50Q8NA57 414 aaPredicted RBP16.66■□□□□ 0.26
BRCA1-228ENST00000618469 P2RY11Q96G91 374 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 PPP1R13BQ96KQ4 1090 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 SERPINB11Q96P15 392 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 FUCA2Q9BTY2 467 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 LHX5Q9H2C1 402 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 SYNCQ9H7C4 482 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 ZDHHC4Q9NPG8 344 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
BRCA1-228ENST00000618469 FAM170AA1A519 330 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 TBC1D3BA6NDS4 549 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 C1QTNF9BB2RNN3 333 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 GFPT2O94808 682 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 PENKP01210 267 aaPredicted RBP16.65■□□□□ 0.26
BRCA1-228ENST00000618469 ERBB2P04626 1255 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 CYBBP04839 570 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 C1QTNF9P0C862 333 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 TIE1P35590 1138 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 DGKGP49619 791 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 ZNF165P49910 485 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 TBX4P57082 545 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 PTPN20Q4JDL3 420 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 FAM183BPQ6ZVS7 135 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 SYT13Q7L8C5 426 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 NOP9Q86U38 636 aaKnown RBP16.65■□□□□ 0.26
BRCA1-228ENST00000618469 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 CCDC33Q8N5R6 958 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 EPS8L1Q8TE68 723 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 SPAG5Q96R06 1193 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 POPDC2Q9HBU9 364 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
BRCA1-228ENST00000618469 EML5Q05BV3 1969 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 SMTNL1A8MU46 457 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TM4SF5O14894 197 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 KLF8O95600 359 aaPredicted RBP16.64■□□□□ 0.25
BRCA1-228ENST00000618469 IGLV3-27P01718 113 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 SPINK2P20155 84 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 JAM2P57087 298 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 YWHAZP63104 245 aaKnown RBP16.64■□□□□ 0.25
BRCA1-228ENST00000618469 MRPS21P82921 87 aaKnown RBP16.64■□□□□ 0.25
BRCA1-228ENST00000618469 STPG1Q5TH74 334 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 SYPL2Q5VXT5 272 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 OR6B2Q6IFH4 312 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TCEAL6Q6IPX3 200 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TOGARAM2Q6ZUX3 1019 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 NUDT18Q6ZVK8 323 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 FAM217AQ8IXS0 508 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 ALLCQ8N6M5 410 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TMEM35BQ8NCS4 154 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 DDI1Q8WTU0 396 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TCEAL3Q969E4 200 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 MMP17Q9ULZ9 603 aa16.64■□□□□ 0.25
BRCA1-228ENST00000618469 TSPAN3O60637 253 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 HSF2BPO75031 334 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 GRAP2O75791 330 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 LATS1O95835 1130 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 HOXA6P31267 233 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 SOX5P35711 763 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 TNFRSF4P43489 277 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 KIR2DL1P43626 348 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 SNX16P57768 344 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 RING1Q06587 406 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 NNTQ13423 1086 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 TAF5Q15542 800 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 EMC10Q5UCC4 262 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 OLFML1Q6UWY5 402 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 BEND5Q7L4P6 421 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 WDR5BQ86VZ2 330 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 UNC45BQ8IWX7 931 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 ZNF513Q8N8E2 541 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 TXNDC5Q8NBS9 432 aaKnown RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 TSTD1Q8NFU3 115 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 SLC20A1Q8WUM9 679 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 FCRL2Q96LA5 508 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-228ENST00000618469 ERGIC2Q96RQ1 377 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 FAM204AQ9H8W3 233 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 TLR6Q9Y2C9 796 aa16.63■□□□□ 0.25
BRCA1-228ENST00000618469 A0A0A0MRY4 1105 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 GIPC1O14908 333 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 IRAK2O43187 625 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 KCNK5O95279 499 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 APBB3O95704 486 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 LSM8O95777 96 aaKnown RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 MMEP08473 750 aa16.62■□□□□ 0.25
BRCA1-228ENST00000618469 CDH5P33151 784 aaPredicted RBP16.62■□□□□ 0.25
BRCA1-228ENST00000618469 CNR2P34972 360 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms