RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KRT34O76011 436 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 TAS2R50P59544 299 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 TRIP10Q15642 601 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 NFE2Q16621 373 aaPredicted RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 TXNRD1Q16881 649 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 LPCAT1Q8NF37 534 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 UTYO14607 1347 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 A0A0D9SFI3 127 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CES2O00748 559 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 MAGEC1O60732 1142 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 SYT15Q9BQS2 421 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CORO1BQ9BR76 489 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 PCDHB3Q9Y5E6 796 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 SH3BGRLO75368 114 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 KATNA1O75449 491 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 RPA3P35244 121 aaPredicted RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 CWF19L1Q69YN2 538 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 S100A9P06702 114 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 ZNF23P17027 643 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 GPD1P21695 349 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 SELENOVP59797 346 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 TRAF2Q12933 501 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 PAGE2BQ5JRK9 111 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 DUS1LQ6P1R4 473 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 MARCH10Q8NA82 808 aaPredicted RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 RAD54BQ9Y620 910 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 TGM2P21980 687 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 PABPC1LQ4VXU2 614 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 MTG1Q9BT17 334 aaPredicted RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 ABHD14A-ACY1A0A1B0GW23 586 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 AREL1O15033 823 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 ULK1O75385 1050 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 NME5P56597 212 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 FAM46CQ5VWP2 391 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 MYCBPAPQ8TBZ2 947 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 THRSPQ92748 146 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 TNKS2Q9H2K2 1166 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 NT5MQ9NPB1 228 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 GLS2Q9UI32 602 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CIAO1O76071 339 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 NR3C2P08235 984 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CREMQ03060 361 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 CRYMQ14894 314 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 USP45Q70EL2 814 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 SNX20Q7Z614 316 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 OSBP2Q969R2 916 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 FAM120BQ96EK7 910 aaKnown RBP12.94□□□□□ -0.34
TCF4-248ENST00000616053 TLE6Q9H808 572 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 XPNPEP3Q9NQH7 507 aa12.94□□□□□ -0.34
TCF4-248ENST00000616053 SLC33A1O00400 549 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 TPST1O60507 370 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 NR2F1P10589 423 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CYP2F1P24903 491 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 GPAT3Q53EU6 434 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CCDC137Q6PK04 289 aaKnown RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 GALNTL5Q7Z4T8 443 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 FAM228AQ86W67 206 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CPA5Q8WXQ8 436 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 KCNK16Q96T55 309 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 CEP72Q9P209 647 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 WDR62O43379 1518 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 LARGE1O95461 756 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 BCL2L1Q07817 233 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 DDR2Q16832 855 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CHST13Q8NET6 341 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
TCF4-248ENST00000616053 MOCS1Q9NZB8 636 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 TSC22D4Q9Y3Q8 395 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 PCDHB5Q9Y5E4 795 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 A0A0X1KG70 313 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 MYL12BO14950 172 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CD3EAPO15446 510 aaKnown RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 MLYCDO95822 493 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 ME2P23368 584 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 FBXO38Q6PIJ6 1188 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CRTAC1Q9NQ79 661 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 GPC6Q9Y625 555 aaPredicted RBP12.93□□□□□ -0.34
TCF4-248ENST00000616053 WASHC1A8K0Z3 465 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 WASH3PC4AMC7 463 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 FAM20BO75063 409 aa12.93□□□□□ -0.34
TCF4-248ENST00000616053 CEBPGP53567 150 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms