RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF362Q5T0B9 420 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMEM63BQ5T3F8 832 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 GJC2Q5T442 439 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SOGA3Q5TF21 947 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MFSD4BQ5TF39 518 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SNRNP48Q6IEG0 339 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 C11orf63Q6NUN7 778 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NIPAL1Q6NVV3 410 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RFWD3Q6PCD5 774 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PGM2L1Q6PCE3 622 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC2A7Q6PXP3 512 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 LIPIQ6XZB0 460 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RBM44Q6ZP01 1051 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MIGA2Q7L4E1 593 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 COPS6Q7L5N1 327 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF571Q7Z3V5 609 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRABD2AQ86V40 505 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF410Q86VK4 478 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RASSF3Q86WH2 238 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD13BQ86YJ7 626 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RHOT2Q8IXI1 618 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF34Q8IZ26 560 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADGRG2Q8IZP9 1017 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF276Q8N554 614 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PRELID2Q8N945 189 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MIGA1Q8NAN2 632 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 KIAA0895Q8NCT3 520 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 OR6Y1Q8NGX8 325 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADAMTS16Q8TE57 1224 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CHPT1Q8WUD6 406 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RFFLQ8WZ73 363 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DDX1Q92499 740 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 JADE3Q92613 823 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MCUR1Q96AQ8 359 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SKA1Q96BD8 255 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NMD3Q96D46 503 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD36BP1Q96IX9 119 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZMAT2Q96NC0 199 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYD88Q99836 296 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DDX50Q9BQ39 737 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NEURL2Q9BR09 285 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM51Q9BSJ1 452 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MXD3Q9BW11 206 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PLA2G12BQ9BX93 195 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 INO80BQ9C086 356 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SENP6Q9GZR1 1112 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLC2Q9H0B6 622 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNF38Q9H0F5 515 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 WNT8AQ9H1J5 351 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDC42EP4Q9H3Q1 356 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 Q9H521 79 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 S100A14Q9HCY8 104 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 KCNK9Q9NPC2 374 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDLIM7Q9NR12 457 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 VPS45Q9NRW7 570 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARL8BQ9NVJ2 186 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NDE1Q9NXR1 346 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKFY1Q9P2R3 1169 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 DKK3Q9UBP4 350 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC24A2Q9UI40 661 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 MTUS1Q9ULD2 1270 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCPG1Q9ULG6 757 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PACSIN2Q9UNF0 486 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 STX8Q9UNK0 236 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 PLA2G4CQ9UP65 541 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRAF3IP3Q9Y228 551 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF652Q9Y2D9 606 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 GIT1Q9Y2X7 761 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 NR2E1Q9Y466 385 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 COL4A3BPQ9Y5P4 624 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 CEPT1Q9Y6K0 416 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 A0A1B0GUL6 1792 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARFGEF2Q9Y6D5 1785 aa4.24□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF536O15090 1300 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 FLT1P17948 1338 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPATA31A3Q5VYP0 1347 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SCN11AQ9UI33 1791 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 FUOMA2VDF0 154 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD62A6NC57 917 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GSG1L2A8MUP6 293 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CAPN14A8MX76 684 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 RASA4BC9J798 803 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPECC1L-ADORA2AF8WAN1 911 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 FBP2O00757 339 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ALOX15BO15296 676 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TM9SF1O15321 606 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 RASA4O43374 803 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 ITM2AO43736 263 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TYROBPO43914 113 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCNT2O60583 730 aaKnown RBP4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 OPHN1O60890 802 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CIB2O75838 187 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TPPPO94811 219 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 HAUS5O94927 633 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 TNFAIP8O95379 198 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CBX6O95503 412 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 CSF1RP07333 972 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GSTT2P0CG29 244 aa4.23□□□□□ -1.73
HMGB1P50-201ENST00000605814 GSTT2BP0CG30 244 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms