RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SMTNL1A8MU46 457 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 PRRT4C9JH25 899 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 I6L893 689 aaPredicted RBP9.15□□□□□ -0.94
SSBP4-208ENST00000600628 HSF2BPO75031 334 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 ENDOD1O94919 500 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 TRUB2O95900 331 aaKnown RBP9.15□□□□□ -0.94
SSBP4-208ENST00000600628 MMEP08473 750 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 NCAM1P13591 858 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 MMP8P22894 467 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 SLC6A4P31645 630 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 KRT9P35527 623 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 USP8P40818 1118 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 SLC6A3Q01959 620 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 C5orf22Q49AR2 442 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 FIGNQ5HY92 759 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 EFHC1Q5JVL4 640 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 FKBP15Q5T1M5 1219 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 PIK3R6Q5UE93 754 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 NUGGCQ68CJ6 796 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 TMEM215Q68D42 235 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 TRNP1Q6NT89 227 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.94
SSBP4-208ENST00000600628 TAC4Q86UU9 113 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 WDR5BQ86VZ2 330 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 RASSF3Q86WH2 238 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 PASD1Q8IV76 773 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 UNC45BQ8IWX7 931 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 TMEM35BQ8NCS4 154 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 RPLP0P6Q8NHW5 317 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 SLC20A1Q8WUM9 679 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 PCDHB18PQ96TA0 734 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 NPY6RQ99463 290 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.94
SSBP4-208ENST00000600628 GABRG3Q99928 467 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 BBS2Q9BXC9 721 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 ARHGEF4Q9NR80 690 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 ST7Q9NRC1 585 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 POLR3BQ9NW08 1133 aaPredicted RBP9.15□□□□□ -0.94
SSBP4-208ENST00000600628 DEC1Q9P2X7 70 aa9.15□□□□□ -0.94
SSBP4-208ENST00000600628 NUP205Q92621 2012 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 NEDD8-MDP1E9PL57 170 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 HRO43593 1189 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 ACSL4O60488 711 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 DAB1O75553 588 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 GFPT2O94808 682 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 APODP05090 189 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TPM2P07951 284 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TGM1P22735 817 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 CNR2P34972 360 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 NOS2P35228 1153 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 PRKCIP41743 596 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 FNTBP49356 437 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 HARS2P49590 506 aaKnown RBP9.14□□□□□ -0.95
SSBP4-208ENST00000600628 SGSHP51688 502 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 CENPCQ03188 943 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 CRY1Q16526 586 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 PREPLQ4J6C6 727 aaPredicted RBP9.14□□□□□ -0.95
SSBP4-208ENST00000600628 EMC10Q5UCC4 262 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 E4F1Q66K89 784 aaPredicted RBP9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TPGS1Q6ZTW0 290 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TOGARAM2Q6ZUX3 1019 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 LONP2Q86WA8 852 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 ZNF683Q8IZ20 524 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 NAT16Q8N8M0 369 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 ACDQ96AP0 544 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 MYEOVQ96EZ4 313 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 PRICKLE1Q96MT3 831 aaPredicted RBP9.14□□□□□ -0.95
SSBP4-208ENST00000600628 SERPINB11Q96P15 392 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 NOX5Q96PH1 765 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 EDEM3Q9BZQ6 932 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 NLRC4Q9NPP4 1024 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 TMEM51Q9NW97 253 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 RRN3Q9NYV6 651 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 AIPL1Q9NZN9 384 aa9.14□□□□□ -0.95
SSBP4-208ENST00000600628 GON4LQ3T8J9 2241 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 A0A1W2PQF6 199 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 SGK1O00141 431 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 PES1O00541 588 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 HMBSP08397 361 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 TFE3P19532 575 aaPredicted RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
SSBP4-208ENST00000600628 HLA-FP30511 346 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 STAT1P42224 750 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 MATKP42679 507 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 DGKGP49619 791 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CXCR3P49682 368 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 TBX4P57082 545 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 DMC1Q14565 340 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 GEN1Q17RS7 908 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 CLEC16AQ2KHT3 1053 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 ANO4Q32M45 955 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 MPPE1Q53F39 396 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 MS4A13Q5J8X5 152 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 TAF3Q5VWG9 929 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 GRAMD4Q6IC98 578 aa9.13□□□□□ -0.95
SSBP4-208ENST00000600628 TRIM72Q6ZMU5 477 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms