RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ZCCHC14Q8WYQ9 949 aaKnown RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 EDEM1Q92611 657 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
IRF3-223ENST00000599223 FAXDC2Q96IV6 333 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 GPR174Q9BXC1 333 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 DCLK3Q9C098 648 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 CIPCQ9C0C6 399 aa15.35■□□□□ 0.05
IRF3-223ENST00000599223 ITPR1Q14643 2758 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 YJEFN3A6XGL0 299 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 MEI4A8MW99 385 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 E7ENQ6 273 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 XPO1O14980 1071 aaKnown RBP15.34■□□□□ 0.05
IRF3-223ENST00000599223 SH3BP5O60239 455 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 GABBR2O75899 941 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 NCAM1P13591 858 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 HLA-FP30511 346 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 BCAT1P54687 386 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 BNC1Q01954 994 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 TCERG1LQ5VWI1 586 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 METTL3Q86U44 580 aaKnown RBP15.34■□□□□ 0.05
IRF3-223ENST00000599223 TMPRSS6Q8IU80 811 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 CHCHD4Q8N4Q1 142 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 ZNF366Q8N895 744 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 DDI1Q8WTU0 396 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 DNASE2BQ8WZ79 361 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 PLD4Q96BZ4 506 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 ZSWIM1Q9BR11 485 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
IRF3-223ENST00000599223 IL21RQ9HBE5 538 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 ITM2CQ9NQX7 267 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 ELOVL2Q9NXB9 296 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 SFMBT1Q9UHJ3 866 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 STRIP2Q9ULQ0 834 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 COQ4Q9Y3A0 265 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 LOC400499M0QZD8 3231 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 NBEAQ8NFP9 2946 aa15.34■□□□□ 0.05
IRF3-223ENST00000599223 SRRM3A6NNA2 597 aaPredicted RBP15.33■□□□□ 0.04
IRF3-223ENST00000599223 O00370 1275 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 CETN3O15182 167 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 TSPAN3O60637 253 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 CALCAP01258 141 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 IGLV3-19P01714 112 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 SYPP08247 313 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 EIF4HQ15056 248 aaKnown RBP15.33■□□□□ 0.04
IRF3-223ENST00000599223 PKDCCQ504Y2 493 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 SERPINA13PQ6UXR4 307 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 RAB44Q7Z6P3 723 aaPredicted RBP15.33■□□□□ 0.04
IRF3-223ENST00000599223 NAXDQ8IW45 347 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
IRF3-223ENST00000599223 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 UBA3Q8TBC4 463 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 WFDC5Q8TCV5 224 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 CYB5D2Q8WUJ1 264 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 TFAP2BQ92481 460 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 FOXJ1Q92949 421 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 SIPA1Q96FS4 1042 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 FAM124BQ9H5Z6 455 aaPredicted RBP15.33■□□□□ 0.04
IRF3-223ENST00000599223 SUSD2Q9UGT4 822 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 MSRB2Q9Y3D2 182 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 PLXNA2O75051 1894 aa15.33■□□□□ 0.04
IRF3-223ENST00000599223 CABIN1Q9Y6J0 2220 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 TMEM8BA6NDV4 472 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 NPC1O15118 1278 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
IRF3-223ENST00000599223 SYNCRIPO60506 623 aaKnown RBP15.32■□□□□ 0.04
IRF3-223ENST00000599223 CYBBP04839 570 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 EPHX1P07099 455 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 CD19P15391 556 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 BST2Q10589 180 aaKnown RBP15.32■□□□□ 0.04
IRF3-223ENST00000599223 LRMPQ12912 555 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 SGO2Q562F6 1265 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 WDR45BQ5MNZ6 344 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 DCAF12L1Q5VU92 463 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 ANKRD40Q6AI12 368 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 FAM124AQ86V42 546 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 C1orf216Q8TAB5 229 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 UCMAQ8WVF2 138 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 ANP32EQ9BTT0 268 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 DNAI2Q9GZS0 605 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 MIR1-1HGQ9H1L0 117 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 TMEM245Q9H330 911 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 LRRC4Q9HBW1 653 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 STOML2Q9UJZ1 356 aa15.32■□□□□ 0.04
IRF3-223ENST00000599223 FNDC3AQ9Y2H6 1198 aaKnown RBP15.32■□□□□ 0.04
IRF3-223ENST00000599223 A0A1B0GTW7 788 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 PIK3R2O00459 728 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 STX10O60499 249 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 CBFA2T3O75081 653 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
IRF3-223ENST00000599223 GNSP15586 552 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 RGS7P49802 495 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 ZNF132P52740 706 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 DAOAP59103 153 aa15.31■□□□□ 0.04
IRF3-223ENST00000599223 CAMK2GQ13555 558 aaPredicted RBP15.31■□□□□ 0.04
IRF3-223ENST00000599223 PTPRNQ16849 979 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms