RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 TNFRSF10AO00220 468 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 CCP110O43303 1012 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 NRDCO43847 1150 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 ACSL4O60488 711 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 ADH1CP00326 375 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 PSMA2P25787 234 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 CXCR3P49682 368 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 OGDHQ02218 1023 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 DHCR24Q15392 516 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 ADGRF1Q5T601 910 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 RAD9BQ6WBX8 426 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 FAM217AQ8IXS0 508 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 ADGRG2Q8IZP9 1017 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 CPXM2Q8N436 756 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 ZNF564Q8TBZ8 553 aaPredicted RBP14.91□□□□□ -0.02
VRK3-213ENST00000597215 FAM172AQ8WUF8 416 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 CENPIQ92674 756 aaPredicted RBP14.91□□□□□ -0.02
VRK3-213ENST00000597215 EDAQ92838 391 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 MSANTD3Q96H12 275 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 DDX50Q9BQ39 737 aaKnown RBP14.91□□□□□ -0.02
VRK3-213ENST00000597215 WDCPQ9H6R7 721 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 C8orf33Q9H7E9 229 aaPredicted RBP14.91□□□□□ -0.02
VRK3-213ENST00000597215 ECT2Q9H8V3 914 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 SPHK2Q9NRA0 654 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 CTTNBP2NLQ9P2B4 639 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 STOML2Q9UJZ1 356 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 PCDHA13Q9Y5I0 950 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 MUC3AQ02505 3323 aa14.91□□□□□ -0.02
VRK3-213ENST00000597215 KCNU1A8MYU2 1149 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 CYP17A1P05093 508 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 GLULP15104 373 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 ATXN1P54253 815 aaKnown RBP14.9□□□□□ -0.02
VRK3-213ENST00000597215 MLLT6P55198 1093 aaPredicted RBP14.9□□□□□ -0.02
VRK3-213ENST00000597215 SIGLEC14Q08ET2 396 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 MLF2Q15773 248 aaPredicted RBP14.9□□□□□ -0.02
VRK3-213ENST00000597215 SLC44A4Q53GD3 710 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 FAM131BQ86XD5 332 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 LRRC8AQ8IWT6 810 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 RHOT2Q8IXI1 618 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 RFFLQ8WZ73 363 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 NCAPGQ9BPX3 1015 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 TRIM7Q9C029 511 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 ARHGEF3Q9NR81 526 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 HEBP1Q9NRV9 189 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 ARHGEF38Q9NXL2 777 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 ANAPC7Q9UJX3 599 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 CA14Q9ULX7 337 aa14.9□□□□□ -0.02
VRK3-213ENST00000597215 PI4K2BG5E9Z4 385 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 MYO1FO00160 1098 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 RNF8O76064 485 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 CYBBP04839 570 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 ADH5P11766 374 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 VCPP55072 806 aaKnown RBP14.89□□□□□ -0.03
VRK3-213ENST00000597215 HDAC4P56524 1084 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 KRT83P78385 493 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 AMPD2Q01433 879 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 PRKCQQ04759 706 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 GAD2Q05329 585 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 ZNF252P-AS1Q0IIN9 211 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 ACAP1Q15027 740 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 LY6G5CQ5SRR4 150 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 ACBD5Q5T8D3 534 aaPredicted RBP14.89□□□□□ -0.03
VRK3-213ENST00000597215 SH3PXD2AQ5TCZ1 1133 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 RHBDF2Q6PJF5 856 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 TPGS1Q6ZTW0 290 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 TTC8Q8TAM2 541 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 SHDQ96IW2 340 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 PDLIM2Q96JY6 352 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 IRX2Q9BZI1 471 aaPredicted RBP14.89□□□□□ -0.03
VRK3-213ENST00000597215 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 IP6K2Q9UHH9 426 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 PIAS3Q9Y6X2 628 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 COL4A3Q01955 1670 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 MYOFQ9NZM1 2061 aa14.89□□□□□ -0.03
VRK3-213ENST00000597215 OTOL1A6NHN0 477 aaPredicted RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 ARHGAP6O43182 974 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 HOXC11O43248 304 aaPredicted RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 PAGE1O75459 146 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 PTMAP06454 111 aaKnown RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 CTHP32929 405 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 PIGHQ14442 188 aaPredicted RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 ANO4Q32M45 955 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 ARL13BQ3SXY8 428 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 FAM133BQ5BKY9 247 aaKnown RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 RAP1GAP2Q684P5 730 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 NADSYN1Q6IA69 706 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 TPRG1Q6ZUI0 275 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 RALGPS2Q86X27 583 aaPredicted RBP14.88□□□□□ -0.03
VRK3-213ENST00000597215 CHSY1Q86X52 802 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 SIX5Q8N196 739 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 NIPA2Q8N8Q9 360 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 ACRBPQ8NEB7 543 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 SLC35G2Q8TBE7 412 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 BBS2Q9BXC9 721 aa14.88□□□□□ -0.03
VRK3-213ENST00000597215 MARK1Q9P0L2 795 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms