RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NPY6RQ99463 290 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 DDX43Q9NXZ2 648 aaKnown RBP23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SLC17A6Q9P2U8 582 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 A0A0A0MRY4 1105 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 DCTN3O75935 186 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 KRT37O76014 449 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SNRPAP09012 282 aaKnown RBP23.43■■□□□ 1.34
SRRM1-222ENST00000596378 CTSHP09668 335 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 NEFHP12036 1026 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 ALDH3A1P30838 453 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 GTF2A1P52655 376 aaPredicted RBP23.43■■□□□ 1.34
SRRM1-222ENST00000596378 CST9Q5W186 159 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 ZNF449Q6P9G9 518 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 PDCD7Q8N8D1 485 aaKnown RBP23.43■■□□□ 1.34
SRRM1-222ENST00000596378 GSTCDQ8NEC7 633 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 GSDMBQ8TAX9 411 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SPATA13Q96N96 652 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 MECRQ9BV79 373 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 TSSK1BQ9BXA7 367 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 SLC13A1Q9BZW2 595 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 TMEM30AQ9NV96 361 aa23.43■■□□□ 1.34
SRRM1-222ENST00000596378 WDR27A2RRH5 827 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 TRDMT1O14717 391 aaKnown RBP23.42■■□□□ 1.34
SRRM1-222ENST00000596378 RFPL1O75677 317 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 AMHP03971 560 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 NOS2P35228 1153 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 NBPF20Q3BBV1 942 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 C4orf22Q6V702 233 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 GPRIN1Q7Z2K8 1008 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 COLGALT1Q8NBJ5 622 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 LRRC39Q96DD0 335 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 SENP8Q96LD8 212 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 KCNK16Q96T55 309 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 GAD1Q99259 594 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 TSPYL2Q9H2G4 693 aaPredicted RBP23.42■■□□□ 1.34
SRRM1-222ENST00000596378 A0A0G2JND7 137 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 HMX2A2RU54 273 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 RNF103O00237 685 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 GABRDO14764 452 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 CBX6O95503 412 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 SERPINB4P48594 390 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 CACNA2D1P54289 1103 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 HUNKP57058 714 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 MROH9Q5TGP6 573 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 MTDHQ86UE4 582 aaKnown RBP23.42■■□□□ 1.34
SRRM1-222ENST00000596378 CCNYQ8ND76 341 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 C3orf58Q8NDZ4 430 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 WNT8BQ93098 351 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 NT5C3BQ969T7 300 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 P2RY11Q96G91 374 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 ULBP1Q9BZM6 244 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 ANLNQ9NQW6 1124 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 MIOSQ9NXC5 875 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 ZNF180Q9UJW8 692 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 CDY2AQ9Y6F7 541 aa23.42■■□□□ 1.34
SRRM1-222ENST00000596378 TSC2P49815 1807 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FAM72CH0Y354 149 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FYNP06241 537 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 C6orf222P0C671 652 aaPredicted RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 T-ENOLP0DO92 83 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 TROVE2P10155 538 aaKnown RBP eCLIP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 CLCNKBP51801 687 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 DEUP1Q05D60 604 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 TAF1BQ53T94 588 aaPredicted RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FAM72AQ5TYM5 149 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 BSPRYQ5W0U4 402 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FAM72DQ6L9T8 149 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 CASC4Q6P4E1 433 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FAM72BQ86X60 149 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 NME8Q8N427 588 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 SLC7A14Q8TBB6 771 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 UTP4Q969X6 686 aaKnown RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 KATNAL1Q9BW62 490 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 DNAI2Q9GZS0 605 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 IQCGQ9H095 443 aaKnown RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 TXLNGQ9NUQ3 528 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 PCDHA11Q9Y5I1 949 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 MYBPHLA2RUH7 354 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 FAM159BA6NKW6 160 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 TOP3BO95985 862 aaKnown RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 HOXC8P31273 242 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 SKIV2L2P42285 1042 aaKnown RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 BNIPLQ7Z465 357 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 CHSY1Q86X52 802 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 OXNAD1Q96HP4 312 aaPredicted RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 RRAGCQ9HB90 399 aa23.41■■□□□ 1.34
SRRM1-222ENST00000596378 XAB2Q9HCS7 855 aaKnown RBP23.41■■□□□ 1.34
SRRM1-222ENST00000596378 C2orf71A6NGG8 1288 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 YJEFN3A6XGL0 299 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 E7ENQ6 273 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 H3BRJ5 948 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 I6L893 689 aaPredicted RBP23.4■■□□□ 1.34
SRRM1-222ENST00000596378 C2CD2LO14523 706 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 FAM200BP0CF97 657 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 SESN2P58004 480 aaPredicted RBP23.4■■□□□ 1.34
SRRM1-222ENST00000596378 PRKD1Q15139 912 aaPredicted RBP23.4■■□□□ 1.34
SRRM1-222ENST00000596378 SWT1Q5T5J6 900 aaKnown RBP23.4■■□□□ 1.34
SRRM1-222ENST00000596378 DEPDC1BQ8WUY9 529 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 KCTD13Q8WZ19 329 aa23.4■■□□□ 1.34
SRRM1-222ENST00000596378 PGLYRP2Q96PD5 576 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms